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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 08:12:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

0086302 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV162440.1:769-788
AGACGGCGGAGTCGCCGAAGGTCATGGAGA769AAGCGGTGTCTTTGTGGAGAGAGAGAAAGTCGGAGAGGGTTTCT
Brassica napus genome assembly, chromosome: C05.
HG994369.1:48746596-48746615
AGACGGCGGAGTCGCCGAAGGTCATGGAGA48746596AAGCGGTGTCTTTGTGGAGAGAGAGAAAGTCGGAGAGGGTTTCTCCGGGG
Brassica oleracea HDEM genome, scaffold: C5.
LR031877.1:46432154-46432173
AGACGGCGGAGTCGCCGAAGGTCATGGAGA46432154AAGCGGTGTCTTTGTGGAGAGAGAGAAAGTCGGAGAGGGTTTCTCCGGGG
BN25.049J23F020118 BN25 Brassica napus cDNA clone BN25049J23, mRNA sequence.
CD823684.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
BN25.071D19F020326 BN25 Brassica napus cDNA clone BN25071D19, mRNA sequence.
CD828590.1:190-209
CCCCGGAGAAACCCTCTCCGACTTTCTCTC190TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.111G05F010523 RFO2 Brassica napus cDNA clone RFO2111G05, mRNA sequence.
CD838479.1:184-203
CCCCGGAGAAACCCTCTCCGACTTTCTCTC184TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.111L08F010523 RFO2 Brassica napus cDNA clone RFO2111L08, mRNA sequence.
CD838555.1:191-210
CCCCGGAGAAACCCTCTCCGACTTTCTCTC191TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.114P11F010529 RFO2 Brassica napus cDNA clone RFO2114P11, mRNA sequence.
CD839351.1:204-223
CCCCGGAGAAACCCTCTCCGACTTTCTCTC204TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.116N08F010622 RFO2 Brassica napus cDNA clone RFO2116N08, mRNA sequence.
CD839833.1:185-204
CCCCGGAGAAACCCTCTCCGACTTTCTCTC185TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.116O01F010622 RFO2 Brassica napus cDNA clone RFO2116O01, mRNA sequence.
CD839847.1:188-207
CCCCGGAGAAACCCTCTCCGACTTTCTCTC188TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.119K08F010605 RFO2 Brassica napus cDNA clone RFO2119K08, mRNA sequence.
CD840515.1:191-210
CCCCGGAGAAACCCTCTCCGACTTTCTCTC191TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.127E18F010919 RFO2 Brassica napus cDNA clone RFO2127E18, mRNA sequence.
CD842378.1:191-210
CCCCGGAGAAACCCTCTCCGACTTTCTCTC191TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
RFO2.132H12F010924 RFO2 Brassica napus cDNA clone RFO2132H12, mRNA sequence.
CD843514.1:194-213
CCCCGGAGAAACCCTCTCCGACTTTCTCTC194TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
51-E022678-021-013-E14-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022E1413Q, mRNA sequence.
CX191657.1:178-197
CCCCGGAGAAACCCTCTCAGACTTTCTCTC178TCTCCACAAAGACACCGCTTTCTCCGTGACCTTCGGAGACTCCGCCGTCA
51-E022738-021-013-E14-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022E1413Q, mRNA sequence.
CX191665.1:178-197
CCCCGGAGAAACCCTCTCCGACTTTCTCTC178TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
JKBNHS1_UP_012_B12_02JUL2004_094 Brassica napus JKBNHS1 Brassica napus cDNA 5', mRNA sequence.
CX281755.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
Brassica oleracea var. viridis mRNA, clone: KALE-014D03, 5' end sequence.
DK460980.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
Brassica oleracea var. viridis mRNA, clone: KALE-133C04, 5' end sequence.
DK506466.1:726-745
CCCCGGAGAAACCCTCTCCGACTTTCTCTC726TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
Brassica oleracea var. viridis mRNA, clone: KALE-014D03, 3' end sequence.
DK520590.1:56-75
CCCCGGAGAAACCCTCTCCGACTTTCTCTC56TCTCCACAAAGACACCGCTTTCTCCATGACCTTTCGGCGACTCCGCCGTC
33ETGS36_UP_007_F02_15MAR2004_006 Brassica napus 33ETGS36 Brassica napus cDNA 5', mRNA sequence.
EE428087.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
35ETGS60_UP_010_C07_12FEB2005_059 Brassica napus 35ETGS60 Brassica napus cDNA 5', mRNA sequence.
EE431970.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
73ETGS36_UP_005_G01_19MAY2005_003 73ETGS36 Brassica napus cDNA 5', mRNA sequence.
EE445092.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
24RDBNH_UP_078_G09_02NOV2005_067 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
EE510095.1:126-145
CCCCGGAGAAACCTTCTCCGACTTTCTCTC126TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
BNQA_UP_045_H03_01OCT2003_017 Brassica napus BNQA Brassica napus cDNA 5', mRNA sequence.
EE551217.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
EST5291 3-9 DAP Brassica Napus seed cDNA library Brassica napus cDNA clone B245D111, mRNA sequence.
EL627785.1:233-252
CCCCGGAGAAACCCTCTCCGACTTTCTCTC233TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
44JK5DM_UP_003_H12_25MAY2004_082 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265641.1:191-210
CCCCGGAGAAACCCTCTCCGACTTTCTCTC191TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
BNARO5GH_T3_021_E02_01DEC2006_008 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence.
ES907144.1:175-194
CCCCGGAGAAACCCTCTCCGACTTTCTCTC175TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
24RDBNH_UP_087_D12_6MAR2006_090 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES914619.1:192-211
CCCCGGAGAAACCCTCTCCGACTTTCTCTC192TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0129491 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
EV124179.1:239-258
CCCCGGAGAAACCCTCTCCGACTTTCTCTC239TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0129531 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
EV124219.1:240-259
CCCCGGAGAAACCCTCTCCGACTTTCTCTC240TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0205616 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV139690.1:213-232
CCCCGGAGAAACCCTCTCCGACTTTCTCTC213TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0206120 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV140194.1:219-238
CCCCGGAGAAACCCTCTCCGACTTTCTCTC219TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0210894 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV144960.1:235-254
CCCCGGAGAAACCCTCTCCGACTTTCTCTC235TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0086385 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV162523.1:201-220
CCCCGGAGAAACCCTCTCCGACTTTCTCTC201TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0086474 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV162612.1:250-269
CCCCGGAGAAACCCTCTCCGACTTTCTCTC250TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0086563 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV162701.1:250-269
CCCCGGAGAAACCCTCTCCGACTTTCTCTC250TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
0089391 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV191910.1:229-248
CCCCGGAGAAACCCTCTCCGACTTTCTCTC229TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
BN24DYSC_UP_047_G10_6FEB2008_068 BN24DYSC Brassica napus cDNA 5', mRNA sequence.
FG574787.1:119-138
CCCCGGAGAAACCCTCTCCGACTTTCTCTC119TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT
Brassica napus cultivar Xiang5A chromosome 11.
CP123886.1:8911989-8912008
CCCCGGAGAAACCCTCTCCGACTTTCTCTC8911989TCTCCACAAAGACACCGCTTTCTCCATGACCTTCGGCGACTCCGCCGTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGCGGTGTCTTTGTGGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGCGGTGTCTTTGTGGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.166 | 0.158 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCGGTGTCTTTGTGGAGA&k=0&no_gap=0&offset=0&limit=50
1.808 | 1.642 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCCACAAAGACACCGCTT&k=0&no_gap=0&offset=0&limit=47
1.831 | 0.023 | cgi_end;

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