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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 05:46:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ovis canadensis canadensis isolate 43U chromosome 15 sequence.
CP011900.1:11804147-11804166
AATGCAGGTAGTAAATATCCTAGTAGTTAA11804147ACAAACCCCAAAAGAACTCAGATTCTCACATTGCAACAAAATTCTGACAT
Cervus elaphus genome assembly, chromosome: 1.
OU343078.1:26991351-26991370
AATGCAGGTAGCTAATATCCAAGTAACTAA26991351ACAAACCCCAAAAGAACTCAGATTCTCACATTGCAACACAATAAAATTTT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 10.
OX459946.2:12789668-12789687
AATGCAGGTAGCTAATATCCAAGTAACTAA12789668ACAAACCCCAAAAGAACTCAGATTCTCACATTGCAACACAATAAAATTTT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 10.
OX596094.1:10382469-10382488
AATGCAGGTAGCTAATATCCAAGTAACTAA10382469ACAAACCCCAAAAGAACTCAGATTCTCACATTGCAACACAATAAAATTTT
Acomys kempi genome assembly, chromosome: 13.
OU015367.1:55643865-55643884
AATTCTTGAGAGTCATGATTTGCCCCCACT55643865TGAGTTCTTTTGGGGTTTGTTTGTTTGTTTGTTTGTTTGCATTTTGGTTT
Sarcophilus harrisii genome assembly, chromosome: 2.
LR735555.1:659343740-659343759
TCTGAAGTCCAGCAATGAGATATGTAGCTT659343740TGAGTTCTTTTGGGGTTTGTTATTGTCTAAAGACATTCCCTGAAAATAGG
Muntiacus reevesi genome assembly, chromosome: 9.
OZ005633.1:78512937-78512956
AAAATTTTCTTGTGTTACAATGTGAGAATC78512937TGAGTTCTTTTGGGGTTTGTTTAGTTACTTGGATATTAGTTACCTGCATT
Parambassis ranga genome assembly, chromosome: 18.
LR131968.1:9326723-9326742
TAATCACTGGGGAAGCTGTTGTCATGATCC9326723TGAGTTCTTTTGGGGTTTGTTTCCTTGTTCTGGGTTTTGTATTTATCAGT
Poecilia reticulata genome assembly, chromosome: 9.
LR880653.1:5423064-5423083
TAAGGTTTTTTGCCAGGATCTTGGTTTGTC5423064TGAGTTCTTTTGGGGTTTGTTTGTTTCTGTGTTACTTACGTTCTTATTTT
Mobula hypostoma genome assembly, chromosome: 8.
OY992599.1:25328110-25328129
CATTGGATATTTGACAGTCCTTTTTTTAAA25328110TGAGTTCTTTTGGGGTTTGTTTCTCAGCTGCCATATAAAGACGAATCTCA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:18020364-18020383
TAATCTCAAGAGCATTATATTTCATCGCAA18020364TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:18368696-18368715
TAATCTCAAGAGCATTATGTTTCATCGCAA18368696TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:17477618-17477637
TAATCTCAAGAGCATTATATTTCATCGCAA17477618TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:18066779-18066798
TAATCTCAAGAGCATTATATTTCATCGCAA18066779TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:18747764-18747783
TAATCTCAAGAGCATTATATTTCATCGCAA18747764TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:18037061-18037080
TAATCTCAAGAGCATTATATTTCATCGCAA18037061TGAGTTCTTTTGGGGTTTGTTTATTCTTCTCCTGATTATTAATCTCTAGT
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:18115464-18115483
TAATCTCAAGAGCATTATATTTCATCGCAA18115464TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus domestica genome assembly, chromosome: 10.
OU696686.1:18397940-18397959
TAATCTCAAGAGCATTATATTTCATCGCAA18397940TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus domestica genome assembly, chromosome: 10.
OU744551.1:18403178-18403197
TAATCTCAAGAGCATTATATTTCATCGCAA18403178TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus domestica genome assembly, chromosome: 10.
OU744962.1:18907259-18907278
TAATCTCAAGAGCATTATATTTCATCGCAA18907259TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus domestica genome assembly, chromosome: 10.
OU745000.1:17922760-17922779
TAATCTCAAGAGCATTATATTTCATCGCAA17922760TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:17504676-17504695
TAATCTCAAGAGCATTATATTTCATCGCAA17504676TGAGTTCTTTTGGGGTTTGTTTATTCTTCCCCTGATTATTAATCTCTAGT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:11928822-11928841
TAATCTCAAGAGCATTATATTTCATGGCAA11928822TGAGTTCTTTTGGGGTTTGTTTATTCTTCTCCTGATTATTAATCTCTAGT
Schistosoma mansoni strain Puerto Rico genome assembly, chromosome: 3.
HE601626.3:31628664-31628683
CACTAAATAAAGATTTTAGTTTACGAAGGG31628664TGAGTTCTTTTGGGGTTTGTTATAAAGAAATATTGGTTCATTTTATTAAG
Schistosoma rodhaini genome assembly, chromosome: 3.
OX103913.1:30868939-30868958
CACTAAATAAAGATTTTAGTTTACGAAGGG30868939TGAGTTCTTTTGGGGTTTGTTATAAAGAAATATTGGTTCATTTTATTAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAAACCCCAAAAGAACTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAAACCCCAAAAGAACTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=ACAAACCCCAAAAGAACTCA&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=TGAGTTCTTTTGGGGTTTGT&k=0&no_gap=0&offset=0&limit=46
0.152 | 0.014 | cgi_end;

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