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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 03:29:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

021115AASA006906W2 (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASA006906, mRNA sequence.
CN881606.1:286-310
TTTGCAGGATCATCCTTGGAGTTGGAAGCA286ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTGAATCCAACAT
NecGex_207C05 Ornamental tobacco (LxS8) Stage 6 Floral Nectary subtracted cDNA library Nicotiana langsdorffii x Nicotiana sanderae cDNA clone NecGEx_Clone 207C05 similar to EF Tu, mRNA sequence.
EB700175.1:279-303
TTGGCTGGGTCATCCTTGGAGTTTGAGGCA279ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTGAACCCAACAT
Petunia x hybrida EST, clone drs13P0014H22_R.ab1 2007-08-10.
FN036473.1:492-516
TTGGCTGGGTCATCCTTGGAGTTAGAGGCA492ACATAACCACGCTTGAGATCCTTGACTGCAACGTTTTTGACGTTGAACCCAACAT
Petunia x hybrida EST, clone drs21P0009M22_R.ab1 2007-08-10.
FN045073.1:490-514
TTGGCTGGGTCATCCTTGGAGTTAGAGGCA490ACATAACCACGCTTGAGATCCTTGACTGCAACGTTTTTGACGTTGAACCCAACAT
Eucalyptus camaldulensis mRNA, clone: ENM002D07, 5'-EST.
FY791940.1:768-792
TTGGCGGGATCGTCCTTTGAGTTGGATGCA768ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTAAACCCAACGT
Eucalyptus camaldulensis mRNA, clone: ENM004H19, 5'-EST.
FY793117.1:804-828
TTGGCGGGATCGTCCTTTGAGTTGGATGCA804ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTAAACCCAACGT
Pq_F_00331 American ginseng Flower cDNA Library Panax quinquefolius cDNA 5', mRNA sequence.
GR870988.1:364-388
TTGGCAGGGTCATCCTTGGAGTTGGATGCA364ACATAACCACGCTTGAGATCCTTGACTCGTTGCACGATATAGTGGCTTATACCAC
Pyrus pyrifolia mRNA, clone: NFR2_15_84, 3' end sequence, expressed in fruit.
HX739882.1:691-715
TTTGCAGGATCATCCTTGGAGTTGGAAGCA691ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTGAATCCAACAT
MSEST2009G13 Sago palm young leaf Metroxylon sagu cDNA clone G12, mRNA sequence.
JK731198.1:741-765
TTTGCTGGGTCATCCTTAGAGTTTGAGGCA741ACATAACCACGCTTGAGATCCTTGACGGCAACGTTCTTGACGTTGAAGCCAACAT
MSEST2009G89 Sago palm young leaf Metroxylon sagu cDNA clone G89, mRNA sequence.
JK731348.1:741-765
TTTGCTGGGTCATCCTTAGAGTTTGAGGCA741ACATAACCACGCTTGAGATCCTTGACGGCAACGTTCTTGACGTTGAAGCCAACAT
TSA: Panax ginseng strain Shi Zhu Shen contig15227.Pagi mRNA sequence.
JI162913.1:164-188
TTGGCAGGGTCATCCTTGGAGTTGGATGCA164ACATAACCACGCTTGAGATCCTTGACTGCAACATTTAAATAGGTTTTCACCCCAG
TSA: Panax ginseng strain Shi Zhu Shen contig15743.Pagi mRNA sequence.
JI163360.1:669-693
TTGGCAGGGTCATCCTTGGAGTTGGATGCA669ACATAACCACGCTTGAGATCCTTGACTGCAACATTCTTGACGTTGAAGCCCACAT
TSA: Pisum sativum Ps_contig_mira-ass_82000 mRNA sequence.
JI963908.1:187-211
TTAGCTGGGTCATCCTTGGAGTTTGAGGCA187ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAAACAATTAAATCCAAA
TSA: Rhynchophorus ferrugineus contig06654.Rhfeelpa mRNA sequence.
JR474117.1:734-758
TTTGCAGGATCATCCTTTGAGTTAGAGGCC734ACATAACCACGCTTGAGATCCTTGACGGCAACATTCTTCACATTGAAACCCACAT
TSA: Pisum sativum contig00302.PisaPYK9 mRNA sequence.
JR951046.1:852-876
TTAGCTGGGTCATCCTTGGAGTTTGAGGCA852ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Medicago truncatula clone mth2-34d21, complete sequence.
AC165943.15:105329-105353
TTGGCTGGGTCATCCTTGGTGTTTGAGGCA105329ACATAACCACGCTTGAGATCCTTGACAGAAACATTCTTAACATTAAATCCCACAT
Medicago truncatula clone mth2-57f22, complete sequence.
AC202360.6:13897-13921
TTGGCTGGGTCATCCTTGGTGTTTGAGGCA13897ACATAACCACGCTTGAGATCCTTGACAGAAACATTCTTAACATTAAATCCCACAT
Eustoma grandiflorum DNA, chromosome 20, draft genome sequence.
AP025059.1:2167344-2167368
TTGGCTGGGTCATCCTTGGAGTTAGATGCA2167344ACATAACCACGCTTGAGATCCTTGACAGCGACGTTCTTCACATTGAACCCGACAT
Eustoma grandiflorum DNA, chromosome 35, draft genome sequence.
AP025074.1:28424097-28424121
TTGGCTGGGTCATCCTTGGAGTTGGAGGCA28424097ACATAACCACGCTTGAGATCCTTGACAGCAACGTTCTTCACATTGAAACCAACAT
Cicer arietinum chromosome Ca8.
CP039338.1:7887973-7887997
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7887973ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP039338.1:7905107-7905131
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7905107ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP039338.1:7928571-7928595
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7928571ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP039338.1:7963034-7963058
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7963034ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP040773.1:7887973-7887997
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7887973ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP040773.1:7905107-7905131
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7905107ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP040773.1:7928571-7928595
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7928571ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Cicer arietinum chromosome Ca8.
CP040773.1:7963034-7963058
TTGGCGGGGTCATCCTTGGAGTTTGATGCA7963034ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:26410690-26410714
TTAGCAGGATCATCTTTGGAGTTCGAGGCC26410690ACATAACCACGCTTGAGATCCTTGACAGAAACATTTTTCACATTGAAGCCAACGT
Daucus carota isolate Kuroda chromosome 4.
CP125304.1:14144992-14145016
TTAGCAGGATCATCTTTGGAGTTCGAGGCA14144992ACATAACCACGCTTGAGATCCTTGACAGAAACATTTTTCACATTGAAGCCAACAT
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:2464262-2464286
TTGGCTGGGTCATCTTTGGTGTTTGAGGCA2464262ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCCACAT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:2877212-2877236
TTGGCTGGGTCATCTTTGGTGTTTGAGGCA2877212ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCCACAT
Ziziphus jujuba cultivar Dongzao chromosome 10.
CP134460.1:12843022-12843046
TTGGCAGGATCATCCTTGGAGTTGGAAGCG12843022ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACATTGAAACCAACAT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 20.
CP135571.1:5451061-5451085
TTGGCAGGATCATCCTTGGAGTTTGATGCA5451061ACATAACCACGCTTGAGATCCTTGACAGAAACATTCTTAACATTGAATCCCACAT
Fragaria x ananassa cultivar Benihoppe chromosome 12.
CP139764.1:22611372-22611396
TTGGCAGGGTCATCCTTGGAGTTGGAGGCA22611372ACATAACCACGCTTGAGATCCTTGACAGCGACATTCTTCACATTGAACCCGACAT
Fragaria x ananassa cultivar Benihoppe chromosome 9.
CP139767.1:23117434-23117458
TTGGCAGGGTCATCCTTGGAGTTGGAGGCA23117434ACATAACCACGCTTGAGATCCTTGACAGCGACATTCTTCACATTGAACCCGACAT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:27486393-27486417
TTTGCAGGATCATCCTTGGAGTTGGAAGCA27486393ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTGAATCCAACAT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:28481885-28481909
TTTGCAGGATCATCCTTGGAGTTGGAAGCA28481885ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTGAATCCAACAT
Fraxinus pennsylvanica genome assembly, chromosome: 11.
OU503046.1:4661285-4661309
TTAGCAGGATCATCCTTGGAGTTAGAGGCC4661285ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACATTGAAACCAACAT
Potentilla anserina genome assembly, chromosome: 3.
OW176983.1:26678482-26678506
TTGGCAGGGTCATCCTTGGAGTTGGAAGCG26678482ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTGACGTTGAATCCCACAT
Medicago arabica genome assembly, chromosome: 1.
OX326964.1:4927590-4927614
TTGGCTGGGTCATCCTTAGTGTTTGAGGCA4927590ACATAACCACGCTTGAGATCCTTGACAGAAACATTCTTAACATTAAATCCCACAT
Ballota nigra genome assembly, chromosome: 5.
OX344724.1:72891137-72891161
TTAGCGGGATCATCCTTGGAGTTGGAGGCA72891137ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACATTGAAACCAACAT
Hedera helix genome assembly, chromosome: 22.
OX359285.1:30897134-30897158
TTGGCAGGATCATCCTTGGAGTTGGACGCA30897134ACATAACCACGCTTGAGATCCTTGACTGCAACGTTCTTGACGTTGAAGCCCACGT
Chenopodium album genome assembly, chromosome: 8.
OX419215.1:61989558-61989582
TTAGCAGGGTCGTTCTTGGAGTCAGAAGCA61989558ACATAACCACGCTTGAGATCCTTGACAGAAACGTTCTTCACGTTGAAACCAACAT
Trifolium dubium genome assembly, chromosome: 14.
OX638075.1:32792560-32792584
TTGGCTGGACCATCCTTGGAGTTTGAGGCA32792560ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCCACAT
Astragalus glycyphyllos genome assembly, chromosome: 7.
OY754313.1:50294738-50294762
TTAGCAGGGTCATCCTTAGAGTTGGAGGCA50294738ACATAACCACGCTTGAGATCCTTGACTGCAACATTCTTAACGTTGAATCCAACAT
Astragalus glycyphyllos genome assembly, chromosome: 7.
OY754313.1:50393364-50393388
TTAGCAGGGTCATCCTTAGAGTTGGAGGCA50393364ACATAACCACGCTTGAGATCCTTGACTGCAACATTCTTAACGTTGAATCCAACAT
Astragalus glycyphyllos genome assembly, chromosome: 7.
OY754313.1:50411261-50411285
TTAGCAGGGTCGTCCTTAGAGTTGGAGGCA50411261ACATAACCACGCTTGAGATCCTTGACTGCAACATTCTTAATGTTGAATCCAACAT
Crataegus laevigata genome assembly, chromosome: 9.
OY756946.1:27975524-27975548
TTTGCAGGATCATCCTTGGAGTTGGAAGCA27975524ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTCACGTTGAATCCAACAT
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:7641781-7641805
TTTGCAGGATCATCCTTGGAGTTGGAAGCA7641781ACATAACCACGCTTGAGATCCTTGACAGCAACGTTCTTCACATTGAACCCAACAT
Lathyrus sativus genome assembly, chromosome: 6.
OZ012740.1:116830467-116830491
TTAGCTGGGTCATCCTTGGAGTTTGAGGCA116830467ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Lathyrus sativus genome assembly, chromosome: 6.
OZ012740.1:116876003-116876027
TTAGCTGGGTCATCCTTGGAGTTTGAGGCA116876003ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT
Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:562100754-562100778
TTAGCTGGGTCATCCTTGGAGTTTGAGGCA562100754ACATAACCACGCTTGAGATCCTTGACAGCAACATTCTTAACATTAAATCCAACAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATAACCACGCTTGAGATCCTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATAACCACGCTTGAGATCCTTGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.822 | 0.814 | search_plus_done; http://172.18.8.135:50400/match?q=ACATAACCACGCTTGAGATCCTTGA&k=0&no_gap=0&offset=0&limit=50
0.873 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAGGATCTCAAGCGTGGTTATGT&k=0&no_gap=0&offset=0&limit=0
0.874 | 0.000 | cgi_end;

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