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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-20 08:31:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 1941 from patent US 8692064.
HJ925796.1:1296-1324
GGCTGGACGAAGGAGATACTTTGGCCATAA1296ACCAACCATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAATAGAAGTAATT
Sequence 74376 from patent US 9012723.
HK638030.1:1089-1117
GGCTGGACGAAGGAGATACTTTGGCCATAA1089ACCAACCATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAATAGAAGTAATT
Sequence 34364 from patent US 9029636.
HK943427.1:1089-1117
GGCTGGACGAAGGAGATACTTTGGCCATAA1089ACCAACCATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAATAGAAGTAATT
N100123e rootphos(-) Medicago truncatula cDNA clone MHRP-2C7, mRNA sequence.
AW125928.2:356-384
AGCCGGACGAAGGAGATACTTTGGTCACAA356ACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGTTCTTGAACAGAAGTAACT
se29e06.y1 Gm-c1015 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1015-2651 5' similar to TR:Q40474 Q40474 AUXIN-INDEPENDENT GROWTH-PROMOTING PROTEIN, mRNA sequence.
AW156690.1:342-370
AGCTGGACGAAGGAGATACTTTGGCCATAA342ACCAACCATTCGTCCAAATGCTAAAAAACTGTATCGATTGTTCTTGAATAGAAGTAATT
MTNAH68TKM KVKC Medicago truncatula cDNA clone pKVKC-8F8, mRNA sequence.
BQ255416.1:345-373
AGCCGGACGAAGGAGATACTTTGGTCACAA345ACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGTTCTTGAACAGAAGTAACT
vsu-ars_028125_LI15contig_15185 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO803092.1:453-481
AGCCGGACGAAGGAGATACTTTGGGCATAA453ACCAACCATTCGTCCAAATGCTAAAAAACTACTACCGACTGTTCTTGAATAGAAGTAAT
TSA: Cajanus cajan cultivar Asha contig07239.Asha mRNA sequence.
EZ655103.1:676-704
AGCCGGGCGAAGGAGATACTTTGGGCATAA676ACCAACCATTCGTCCAAATGCTAAAAAACTCTATCGATTATTCTTGAATAGAAGTAATT
TSA: Ficus carica mRNA, contig: FICAF01606.
FX378580.1:114-142
AGCCGGACGAAGGAGATATTTTGGGCACAA114ACCAACCATTCGTCCAAATGCTAAAAAACTATACCGATTGTTCTTGGGCAAAGATAACA
TSA: Medicago truncatula Contig5096.Metrroot mRNA sequence.
JR372761.1:3-31
AA3ACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGTTCTTGAACAGAAGTAACT
AIGP, Lupinus angustifolius 83A:476 Lupinus angustifolius 83A:476 genomic intron sequences Lupinus angustifolius genomic, genomic survey sequence.
DU723423.1:363-391
GCTTTCTTATAGGAGGTACTTCGGGCACAA363ACCAACCATTCGTCCAAATGCTAAAAAAC
AIGP, Lupinus angustifolius P27255 Lupinus angustifolius P27255 genomic intron sequences Lupinus angustifolius genomic, genomic survey sequence.
DU723475.1:374-402
GCTTTCTTATAGGAGGTACTTCGGGCACAA374ACCAACCATTCGTCCAAATGCTAAAAAAC
VUK060B03.R VUK Phaseolus vulgaris genomic 3', genomic survey sequence.
JY696578.1:219-247
ACTTTTTTGTAGGAGATACTTTGGGCATAA219ACCAACCATTCGTCCAAATGCTAAAAAACTCTACCGACTGTTCTTGAATAGAAGTAATA
VUK060J09.R VUK Phaseolus vulgaris genomic 3', genomic survey sequence.
JY877591.1:219-247
ACTTTTTTGTACGATATACTTTGGGCATAA219ACCAACCATTCGTCCAAATGCTAAAAAACTCTACCGACTGTTCTTGAATAGAAGTAATA
Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:1532355-1532383
ACTTTCTTGTAGGAGATACTTTGGGCATAA1532355ACCAACCATTCGTCCAAATGCTAAAAAACTCTACCGATTGTTCTTGAATAGAAGAAACA
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-13.
CP023125.1:7381515-7381543
ACTTTCTTGTAGGAGATACTTTGGACACAA7381515ACCAACCATTCGTCCAAATGCTAAAAAACTCTATCGATTGTTCTTGAGCCGAAGCAATT
Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:1455170-1455198
ACTTTCTTGTAGGAGATACTTTGGCCATAA1455170ACCAACCATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAATAGAAGTAATT
Glycine max cultivar Williams 82 chromosome 6.
CP126431.1:1414941-1414969
ACTTTCTTGTAGGAGATACTTTGGCCATAA1414941ACCAACCATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAATAGAAGTAATT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 3.
CP135580.1:527592-527620
TTTTGTGTGCAGGAAATATTTTGGGCACAA527592ACCAACCATTCGTCCAAATGCTAAAAAACTCTATCGGCTATTCTTGAACCACACCAACT
UNVERIFIED: Campsiandra comosa voucher K:T. Pennington 341 AIGP gene, partial sequence.
KY320652.1:430-458
ACTTCCCTGTAGGAGATACTTTGGGCATAA430ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Vachellia caven voucher MT:no.386-89 AIGP gene, partial sequence.
KY320654.1:433-461
TATTTCCTGTAGGAGATACTTTGGGCACAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Mimosa quitensis voucher K:Klitgaard 647 AIGP gene, partial sequence.
KY320655.1:432-460
TATTTCCTGTAGGAGATACTTTGGGCATAA432ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Inga cf. edulis Klitgaard 677 voucher K:Klitgaard 677 AIGP gene, partial sequence.
KY320656.1:433-461
TATTTCCTGTAGGAGATACTTTGGGCATAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Parkia multijuga voucher K:voucher Klitgaard 697 AIGP gene, partial sequence.
KY320657.1:433-461
TATTTCATGTAGGAGATACTTTGGGCACAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Calliandra trinervia voucher K:Klitgaard 622 AIGP gene, partial sequence.
KY320658.1:433-461
TATTTCCTGTAGGAGATACTTTGGTCACAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Calliandra haematocephala voucher MT:Archambault sn AIGP gene, partial sequence.
KY320659.1:433-461
TATTTCCTGTAGGAGATACTTTGGTCACAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Dinizia sp. Folli 4889 voucher K:Folli 4889 AIGP gene, partial sequence.
KY320660.1:433-461
TATTTCCTGTAGGAGATACTTTGGGCACAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Dinizia sp. Folli 4884 voucher K:Folli 4884 AIGP gene, partial sequence.
KY320661.1:433-461
TATTTCCTGTAGGAGATACTTTGGGCACAA433ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Peltophorum pterocarpum voucher US:Herendeen 12-XII-97-2 AIGP gene, partial sequence.
KY320662.1:434-462
TATTTCCTGTAGGCGATCCTTGGGGCACAA434ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Dimorphandra conjugata voucher WAG:Breteler 13800 AIGP gene, partial sequence.
KY320663.1:435-463
GACTTCCTGTAGGAGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Moldenhawera brasiliensis voucher K:Queiroz 5530 AIGP gene, partial sequence.
KY320664.1:435-463
GATTTCCTGTAGGAGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Mora gonggrijpii voucher WAG:Breteler 13792 AIGP gene, partial sequence.
KY320665.1:435-463
GATTTCCTGTAGGAGATAGTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Jacqueshuberia brevipes voucher US:Redden 1240 AIGP gene, partial sequence.
KY320666.1:435-463
GATTTCCTGTAGGAGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Tachigali vasquezii voucher K:Neill 13998 AIGP gene, partial sequence.
KY320667.1:435-463
GATTTCCTGTAGGAGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Tachigali paniculata voucher NY:T.W Henkel 657 AIGP gene, partial sequence.
KY320668.1:435-463
GATTTCCTGTAGGAGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Bussea perrieri voucher P:Randrianasolo 527 AIGP gene, partial sequence.
KY320669.1:435-463
CATTTCCCGTAGGAGATCCTTGGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Schizolobium parahyba voucher K:Klitgaard 694 AIGP gene, partial sequence.
KY320670.1:435-463
GATTTCTTGTAGGAGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Colvillea racemosa voucher MT:Bruneau 1397 AIGP gene, partial sequence.
KY320671.1:435-463
GATTTCCTGCAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Colvillea racemosa voucher MT:Bruneau 1360 AIGP gene, partial sequence.
KY320672.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix boiviniana voucher MT:Bruneau 1381 AIGP gene, partial sequence.
KY320673.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix boiviniana voucher MT:Bruneau 1357 AIGP gene, partial sequence.
KY320674.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix boiviniana voucher MT:Bruneau 1378 AIGP gene, partial sequence.
KY320675.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix boiviniana voucher MT:Bruneau 1401 AIGP gene, partial sequence.
KY320676.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix boiviniana voucher MT:Andriamihajarivo 919 AIGP gene, partial sequence.
KY320677.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix regia voucher MT:Bruneau s.n. A AIGP gene, partial sequence.
KY320678.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix regia voucher MT:Bruneau s.n. B AIGP gene, partial sequence.
KY320679.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix regia voucher MT:Bruneau s.n. C AIGP gene, partial sequence.
KY320680.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix regia voucher MT:T. Bradley 31902 AIGP gene, partial sequence.
KY320681.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix regia voucher MT:Bruneau 1320 AIGP gene, partial sequence.
KY320682.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix regia voucher MT:Bruneau 1355 AIGP gene, partial sequence.
KY320683.1:435-463
GGTTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix decaryi voucher MO:DJ & BP Du Puy M94 AIGP gene, partial sequence.
KY320684.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix leucantha voucher P:Allorge 904 AIGP gene, partial sequence.
KY320685.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix floribunda voucher MT:Bruneau 1398 AIGP gene, partial sequence.
KY320686.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix floribunda voucher MT:Bruneau 1409 AIGP gene, partial sequence.
KY320687.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix floribunda voucher MT:Bruneau 1405 AIGP gene, partial sequence.
KY320688.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix edule voucher K:Du Puy M1033 AIGP gene, partial sequence.
KY320689.1:435-463
GATTTCCTGTAGGCGATACTTTGGCCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix tomentosa voucher K:Perrier de la Bathie 1325 AIGP gene, partial sequence.
KY320690.1:435-463
GATTTCCTGTAGGCGATACTTTGGCCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix elata voucher US:Herendeen 20-XII-97-1 AIGP gene, partial sequence.
KY320692.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix pumila voucher MT:Bruneau 1412 AIGP gene, partial sequence.
KY320694.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
UNVERIFIED: Delonix elata voucher US:Herendeen 17-XII-97-2 AIGP gene, partial sequence.
KY320696.1:435-463
GATTTCCTGTAGGCGATACTTTGGGCACAA435ACCAACCATTCGTCCAAATGCTAAAAAACA
Vicia faba genome assembly, chromosome: 2.
OX451737.1:1339059505-1339059533
ACTTTCTTATAGGAGATACTTTGGGCACAA1339059505ACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGTTCATGAACAGAAATAATT
Trifolium dubium genome assembly, chromosome: 15.
OX638076.1:779415-779443
ACTTTCTTATAGGAGATACTTTGGGCACAA779415ACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGCTCATGAACAAAAGTAATT
Medicago lupulina genome assembly, chromosome: 6.
OY283144.1:1341324-1341352
ATTTTCTTATAGGAGATACTTTGGTCACAA1341324ACCAACCATTCGTCCAAATGCTAAAAAACTCTACAGATTGTTCATGAACAGAAGTAATT
Sphenostylis stenocarpa genome assembly, chromosome: 9.
OY731406.1:1959845-1959873
ACTTTCTTGCAGGAGATACTTTGGGCATAA1959845ACCAACCATTCGTCCAAATGCTAAAAAACTCTATCGATTGTTCTTGAATAGAAGTAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCAACCATTCGTCCAAATGCTAAAAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCAACCATTCGTCCAAATGCTAAAAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.641 | 0.632 | search_plus_done; http://172.18.8.135:50400/match?q=ACCAACCATTCGTCCAAATGCTAAAAAAC&k=0&no_gap=0&offset=0&limit=50
0.699 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTTTTAGCATTTGGACGAATGGTTGGT&k=0&no_gap=0&offset=0&limit=0
0.699 | 0.000 | cgi_end;

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