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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 21:52:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS2A117TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW722275.1:242-263
TCAAACAACGGATGGGCTCCGTTCAACGGA242ACCGAAGGAACAAAGAGACTCGGCGAGCTCGATCTAGCCTTCCTTTCTTCCT
RS2A117TV RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW722276.1:242-263
TCAAACAACGGATGGGCTCCGTTCAACGGA242ACCGAAGGAACAAAGAGACTCGGCGAGCTCGATCTAGCCTTCCTTTCTTCCT
TSA: Raphanus sativus var. sativus RNA, contig: WG3_17484.
FX670541.1:1167-1188
AGGAAGAAAGGAAGGCTAGATCGAGCTCGC1167CGAGTCTCTTTGTTCCTTCGGTTCCGTTGAACGGAGCCCATCCGTTGTTTGA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_76012.
FX781741.1:109-130
AGGAAGAAAGGAAGGCTAGATCGAGCTCGC109CGAGTCTCTTTGTTCCTTCGGTTCCGTTGAACGGAGCCCATCCGTTGTTTGA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:24562658-24562679
AGGAAGAAAGGAAGGCTAGATCGAGCTCGC24562658CGAGTCTCTTTGTTCCTTCGGTTCCGTTGAACGGAGCCCATCCGTTGTTTGA
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:24562658-24562679
AGGAAGAAAGGAAGGCTAGATCGAGCTCGC24562658CGAGTCTCTTTGTTCCTTCGGTTCCGTTGAACGGAGCCCATCCGTTGTTTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCGAAGGAACAAAGAGACTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCGAAGGAACAAAGAGACTCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.229 | 0.221 | search_plus_done; http://172.18.8.135:50400/match?q=ACCGAAGGAACAAAGAGACTCG&k=0&no_gap=0&offset=0&limit=50
0.258 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=CGAGTCTCTTTGTTCCTTCGGT&k=0&no_gap=0&offset=0&limit=48
0.261 | 0.003 | cgi_end;

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