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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 19:12:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Takifugu rubripes genome assembly, chromosome: 5.
LR584247.1:12585930-12585947
ACCTTTACGTTCCACCGCGTCGCTGAACCG12585930ACCGTCCGTCCTCTCGTCTCACCACTCTGGAGCAGCAATCTCTGTGCC
Pelobates cultripes genome assembly, chromosome: 02.
OW240913.1:99034392-99034409
ATCCATGGTGTCCCGCGCCGTCCCGGTCCC99034392ACCGTCCGTCCTCTCGTCTCGGGCGTTGTGGGTCGCTGGCGGGCGTTG
TSA: Musa acuminata AAA Group Unigene65982_B1 mRNA sequence.
JV314491.1:27-44
CTTGACTCTGACGAAAACGCCACCGC27ACCGTCCGTCCTCTCGTCCCTCTCTCTCTCTCTCTCTCTCTTCTCTTG
TSA: Cyclocybe aegerita AA_22807, mRNA sequence.
JW852844.1:195-212
GATTTTCCAACGGATATTCTTACACACCGC195ACCGTCCGTCCTCTCGTCTCGATCATCAGGACGGCGATGATCATAGCG
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:36923564-36923581
CGACACTTACTCTGACGAAAACGCCACCGC36923564ACCGTCCGTCCTCTCGTCACTCTCTCTCTCTCTCTTCTCTTGCGCTTT
Ophiostoma piceae strain CECT20416 chromosome 6.
CP135127.1:232558-232575
AAAGAAAGGCATCTGTCCGCCGTCTTGTCC232558ACCGTCCGTCCTCTCGTCTGCCTGTCACTCTGTCACTCCCTCCAGCCT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:37812804-37812821
CGACACTTACTCTGACGAAAACGCCACCGC37812804ACCGTCCGTCCTCTCGTCACTCTCTCTCTCTCTCTTCTCTTGCGCTTT
Musa schizocarpa genome assembly, chromosome: S06.
LS990921.1:41419535-41419552
CACACTTGACTCTGACGAAAACGCCACCGC41419535ACCGTCCGTCCTCTCGTCCCTCTCTCTCTCTGTCTCTTCTCTTGCGCT
Cenchrus americanus genome assembly, chromosome: PMC23DB2.
OX387240.1:117254796-117254813
AGCACGCGGACTATCCGCCGTGCACCGCGG117254796ACCGTCCGTCCTCTCGTCGGACCGTCCGAAACTCCGTCCAACCAAAAA
Streptomyces sp. NBC_00523 chromosome, complete genome.
CP107836.1:3404286-3404303
ACCTCCTGCCGCCCGGCACAGCGCCCCCGC3404286ACCGTCCGTCCTCTCGTCCCGCCTGGCCTCCAAGCCCGGCCCCTGCCA
Buathra laborator genome assembly, chromosome: 4.
OW203895.1:10404538-10404555
CAGTCGACCGATCTTTCCCCTCGGTCAGCG10404538ACCGTCCGTCCTCTCGTCGTCTTTGAAACGCCATATACGCCAAGTCGG
Yponomeuta malinellus genome assembly, chromosome: 18.
OX371012.1:9748329-9748346
TCGGCAACCACTCTGTGAGTGCCTTCGTCC9748329ACCGTCCGTCCTCTCGTCTAGCTAGAGGTCCCGCCCATCTCTAATTAA
Yponomeuta malinellus genome assembly, chromosome: 26.
OX371020.1:3686517-3686534
TTGGCCACCACTCTGTGACTGCCTTCGTCC3686517ACCGTCCGTCCTCTCGTCTAACCAGATGTCCCGCCCGTCTCTACTTAA
Yponomeuta cagnagella genome assembly, chromosome: 18.
OX371246.1:10378572-10378589
TCGGCCACCACTCTGTGAGTGCCTTCGTCC10378572ACCGTCCGTCCTCTCGTCTACCTAGAGGTCCCGCCCATCTCTAATTAA
Yponomeuta cagnagella genome assembly, chromosome: 26.
OX371254.1:3851009-3851026
TTGGCCACCACTCTGTGACTGCCTTCGTCC3851009ACCGTCCGTCCTCTCGTCTAACCAGATGTCCCGCCCGTCTCTACTTAA
Yponomeuta cagnagella genome assembly, chromosome: 18.
OX371285.1:10091850-10091867
TCGGCCACCACTCTGTGAGTGCCTTCGTCC10091850ACCGTCCGTCCTCTCGTCTAGCTAGAGGTCCCGCCCATCTCTAATTAA
Ceriagrion tenellum genome assembly, chromosome: 1.
OY720632.1:180270295-180270312
CCTCTCACGTCACCCCCTGCCACTCCTCCG180270295ACCGTCCGTCCTCTCGTCGTCGCGGGAGTGCGCGCGTTCGATCCGGCC
Pyrrhosoma nymphula genome assembly, chromosome: 1.
OY754327.1:180468979-180468996
TTTCCATCTTCCCCCCTCGGCCCTCCGCCA180468979ACCGTCCGTCCTCTCGTCGCGGGAGTGCGCGCGTTCGATCCGACCGTC
Caenorhabditis sinica genome assembly, chromosome: III.
OZ009943.1:593985-594002
GATGAACACCCCATCGGAGACATCGTCCCA593985ACCGTCCGTCCTCTCGTCCACCGCCATGTTGGAGACGTCGATGGTAGT
Martes martes genome assembly, chromosome: 4.
OY734066.1:189823783-189823800
AGAGGCTGAGGCACGCGATGCCACGTGCAT189823783GACGAGAGGACGGACGGTGTCTGTTTTCTGTGCACATGGGGTTTGCTG
Pelobates cultripes genome assembly, chromosome: 05.
OW240916.1:146779174-146779191
CGATGTCCGCCAGCGATCCACACCGCCCGA146779174GACGAGAGGACGGACGGTGGGACCGGGACGGTGCAGGATACCAGGTAT
Pelobates cultripes genome assembly, chromosome: 05.
OW240916.1:209252060-209252077
CGACGCCCCCCAACGATCCACACCGCCCGC209252060GACGAGAGGACGGACGGTGGGACCGGGACGGCGCAGGACTCAAGGTAT
Pelobates cultripes genome assembly, chromosome: 11.
OW240922.1:70216452-70216469
CGACGCCCGCCAGCGATCCACACCGCCCAG70216452GACGAGAGGACGGACGGTGGGACCGGGGTGGTGCGGGACATCAGGTAT
PV_ABb221D09.F PV_ABb Panicum virgatum genomic 5', genomic survey sequence.
JM892872.1:717-734
GCGCGGCGCGAGGCTGGGATGCGGCCGCAG717GACGAGAGGACGGACGGTGGTGCTCCGGTGAGAGCTTGGAGTAATGGA
Ascochyta rabiei isolate Me14 chromosome 14.
CP095301.1:328122-328139
TCCATTCTACTCTACGGATTCTACGCGCGC328122GACGAGAGGACGGACGGTCACTGACACGATGTAGATGGAGGCGCGCAA
Digitaria exilis genome assembly, chromosome: 3A.
LR994608.1:39682772-39682789
AGCCCACTGGGCTGTTCGTTCCCACTCGAC39682772GACGAGAGGACGGACGGTGGGCCCGTCGAAGAAATCCTCTCCGTCGGT
Brevundimonas pondensis strain LVF1 chromosome, complete genome.
CP062006.1:1259163-1259180
GCGCAATAAGGTCTAGAGGGCTTTCCATGG1259163GACGAGAGGACGGACGGTGGCGCAAGCCGGGCCGCCGTCTTTCGCTCG
Clusia tigrina genome assembly, chromosome: 3.
OV050033.1:126592029-126592046
ATTTCCGAATTCCACTGCTGCCTACGGATG126592029GACGAGAGGACGGACGGTAGGCGGATAGTCGGACAATTGGGAGAGGAC
Yponomeuta malinellus genome assembly, chromosome: 2.
OX370996.1:7113951-7113968
ATGCGATGGGTAAGTTCGGATGTCTGATTA7113951GACGAGAGGACGGACGGTGGACGAGGGCAGTCACGGAGTGGTGGCGGA
Yponomeuta malinellus genome assembly, chromosome: 19.
OX371013.1:1296073-1296090
CTAAGTGGACATGGGCGCGACATCTGGTAA1296073GACGAGAGGACGGACGGTGGACGATAGCAGTTGATGACCTTAAGAAGG
Yponomeuta cagnagella genome assembly, chromosome: 2.
OX371230.1:7068065-7068082
ATGCGATGGGTAAGTTGGGATGTCTGATTA7068065GACGAGAGGACGGACGGTGGACGAAGGCAGTCACGGAGTGGTGGCGGA
Yponomeuta cagnagella genome assembly, chromosome: 19.
OX371247.1:1244338-1244355
CTAAGTGGACATGGGCGCGACATCTGGTAA1244338GACGAGAGGACGGACGGTGGACGATAGCAGTTGATGACCTTAAGAAGG
Yponomeuta cagnagella genome assembly, chromosome: 2.
OX371269.1:7100843-7100860
ATGCGATGGGTAAGTTGGGATGTCTGATTA7100843GACGAGAGGACGGACGGTGGACGAGGGCAGTCACGGAGTGGTGGCGGA
Yponomeuta cagnagella genome assembly, chromosome: 19.
OX371286.1:1339206-1339223
AGGTCAAGCCTGTCCTGTGAGGACCGTGTG1339206GACGAGAGGACGGACGGTGGACGATAGCAGTTGATGACCTTAAGAAGG
Cerastis rubricosa genome assembly, chromosome: 18.
OX424541.1:8043420-8043437
TCACGGTTCATGAGATACAGCCAGGTGACA8043420GACGAGAGGACGGACGGTCAGCGAAGTCTCAGTAATAGGGTCGCGTTT
Zelleria hepariella genome assembly, chromosome: 2.
OX439380.1:23304523-23304540
GAGTAATCCGTTAGTTGGAAAATCTGGTTA23304523GACGAGAGGACGGACGGTGTCAAAGCCTAGTCTTACTCAAATGACTTC
Stomoxys calcitrans genome assembly, chromosome: 2.
OY720436.1:126226050-126226067
TTTATATGGCAGCGGACGGACGGACGGGAG126226050GACGAGAGGACGGACGGTCGAGAGGACGGACGGACGGGAGGACGGACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCGTCCGTCCTCTCGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCGTCCGTCCTCTCGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.141 | 0.133 | search_plus_done; http://172.18.8.135:50400/match?q=ACCGTCCGTCCTCTCGTC&k=0&no_gap=0&offset=0&limit=50
0.249 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=GACGAGAGGACGGACGGT&k=0&no_gap=0&offset=0&limit=31
0.260 | 0.011 | cgi_end;

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