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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 07:36:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38701629-38701648
AAAGAGGAAATTAGCGCCAATTGAGGTAAG38701629ACCTCCCGCCAATAGAAAACCGCCACGTCGACATAATAATAGAAATGGTC
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:38531005-38531024
AAAGAGGAAATTAGTGCGACGTGAGTTAAG38531005ACCTCCCGCCAATAGAAAACCGCCACGTCGACATCATAATAGAAATGGTC
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:25671166-25671185
AAAGAGGAAATTAGTGCCGATTGAGGTAAG25671166ACCTCCCGCCAATAGAAAACCGCCACGTTGACATCATAATAGAAATGGTC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2435723-2435742
GACCATTTCTATTATTATGTCGACGTGGCG2435723GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2394065-2394084
GACCATTTCTATTATTATGTCGACGTGGCG2394065GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2481916-2481935
GACCATTTCTATTATTATGTCGACGTGGCG2481916GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2588362-2588381
GACCATTTCTATTATTATGTCGACGTGGCG2588362GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2413691-2413710
GACCATTTCTATTATTATGTCGACGTGGCG2413691GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2543649-2543668
GACCATTTCTATTATTATGTCGACGTGGCG2543649GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2536220-2536239
GACCATTTCTATTATTATGTCGACGTGGCG2536220GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2593039-2593058
GACCATTTCTATTATTATGTCGACGTGGCG2593039GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2627536-2627555
GACCATTTCTATTATTATGTCGACGTGGCG2627536GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2604470-2604489
GACCATTTCTATTATTATGTCGACGTGGCG2604470GTTTTCTATTGGCGGGAGGTCTTACCTCAATTGGCGCTAATTTCCTCTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCTCCCGCCAATAGAAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCTCCCGCCAATAGAAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=ACCTCCCGCCAATAGAAAAC&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTTCTATTGGCGGGAGGT&k=0&no_gap=0&offset=0&limit=47
0.123 | 0.006 | cgi_end;

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