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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 07:08:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 56627 from Patent WO2014036048.
JC806252.1:344-363
AAGGATCTTTCATCAAACCACAAATATATA344ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGCCACT
PUAAC68TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa001L15, genomic survey sequence.
BZ632794.1:376-395
AAGGATCTTTCATCAAACCACAAATATATA376ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGCCACT
PUGEO11TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa366B21, genomic survey sequence.
BZ803428.1:705-724
AAGGATCTTTCATCAAACCACAAATATATA705ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGCCACT
PUDDU01TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa164B01, genomic survey sequence.
BZ993056.1:346-365
AAGGATCTTTCATCAAACCACAAATATATA346ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGCCACT
PUFKM37TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0671G01, genomic survey sequence.
CG126762.1:204-223
AAGGATCTTTCATCAAACCACAAATATATA204ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGCCACT
Zea mays cultivar LT2357 chromosome 1.
CP116739.1:259073605-259073624
AAGGATCTTTCATCAAACCACAAATATATA259073605ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGTCGCT
Cucumis melo isolate PI 511890 chromosome 2.
CP136103.1:851426-851445
AATATATATATATATATGGGGAAAACTAGG851426ACGACCAACCAAACCATATCCCCCAAACATTGGAAAGTGTAGTTGTTTGT
Cucumis melo genomic scaffold, anchoredscaffold00025.
LN681806.1:842135-842154
AAATATATATATATATATGAGAAAACTAGG842135ACGACCAACCAAACCATATCCCCCAAACATTGGAAAGTGTAGTTGTTTGT
Cucumis melo genomic chromosome, chr_2.
LN713256.1:842135-842154
AAATATATATATATATATGAGAAAACTAGG842135ACGACCAACCAAACCATATCCCCCAAACATTGGAAAGTGTAGTTGTTTGT
Zea mays genome assembly, chromosome: 1.
LR897967.1:264633803-264633822
AAGGATCTTTCATCAAACCACAAATATATA264633803ACGACCAACCAAACCATATCTTAACTAATCATGTGAGGGTCCATGCCACT
PUAAC68TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa001L15, genomic survey sequence.
BZ632797.1:289-308
AGTGGCATGGACCCTCACATGATTAGTTAA289GATATGGTTTGGTTGGTCGTTATATATTTGTGGTTTGATGAAAGATCCTT
Zea mays cultivar B73 chromosome 1 clone CH201-311F16, *** SEQUENCING IN PROGRESS ***, 24 unordered pieces.
AC207106.4:64452-64471
AGTGGCATGGACCCTCACATGATTAGTTAA64452GATATGGTTTGGTTGGTCGTTATATATTTGTGGTTTGATGAAAGATCCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGACCAACCAAACCATATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGACCAACCAAACCATATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.176 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=ACGACCAACCAAACCATATC&k=0&no_gap=0&offset=0&limit=50
0.208 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GATATGGTTTGGTTGGTCGT&k=0&no_gap=0&offset=0&limit=40
0.209 | 0.001 | cgi_end;

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