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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 05:46:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

uncultured Methanoregula sp. isolate 16354076-71c5-4ad2-a3f6-d0882f86870f genome assembly, chromosome: 27.
OY781314.1:94140-94159
GATGGCGGGTGCATTCATTTTCATCGGCTT94140ACTCATCACCACAGAAGCGATCGTGATTAATTACGCGTACACCCTGCAGA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40157146-40157165
ATGCTTTGTGATCGATAAGTTAATGTCAGT40157146ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29588981-29589000
ATGCTTTGTGATCGATAAGTTAATTTCAGT29588981ACTCATCACCACAGAAGCGAAATTTTCAAGAGACGTGCGTGCTGCAATTG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29626073-29626092
ATGCTTTGTGATCGATAAGTTAATTTCAGT29626073ACTCATCACCACAGAAGCGAAACTTGTGCGTGCTGAAATTGGTTTTCTTA
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:32707819-32707838
ATGCTTTGTGATCAATAAGTTAATTTCGCT32707819ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTGAAATTG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29234089-29234108
ATGCTTTGTGATCGATAAGTTAATTTCACT29234089ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:31325606-31325625
ATGCTTTGTGATCAATAAGTTAATTTCGCT31325606ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTGAAATTG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27962624-27962643
ATGCTTTGTGATCGATAAGTTAATTTCACT27962624ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:31015146-31015165
ATGCTTCGTGATCAATAAGTTAATTTCGCT31015146ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTACGTGCTGAAGTTG
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25947672-25947691
ATGCTTTGTGATCGATAAGTTAATTTCACT25947672ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25976598-25976617
ATGCTTTGTGATCGATAAGTTAATTTCACT25976598ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:31820586-31820605
ATGCTTTGTGATCAATAAGTTAATTTCGCT31820586ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTGAAATTG
Malus domestica genome assembly, chromosome: 1.
OU696677.1:25982067-25982086
ATGCTTTGTGATCGATAAGTTAATTTCAGT25982067ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAATTG
Malus domestica genome assembly, chromosome: 7.
OU696683.1:31202692-31202711
ATGCTTTGTGATCAATAAGTTAATTTCGCT31202692ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTAAAATTG
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29753253-29753272
ATGCTTTGTGATCGATAAGTTAATTTCACT29753253ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29782179-29782198
ATGCTTTGTGATCGATAAGTTAATTTCACT29782179ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus domestica genome assembly, chromosome: 7.
OU744548.1:32371341-32371360
ATGCTTTGTGATCAATAAGTTAATTTCGCT32371341ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTGAAATTG
Malus domestica genome assembly, chromosome: 7.
OU744959.1:31817107-31817126
ATGCTTTGTGATCAATAAGTTAATTTCGCT31817107ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTAAAATTG
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26226921-26226940
ATGCTTTGTGATCGATAAGTTAATTTCACT26226921ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26255853-26255872
ATGCTTTGTGATCGATAAGTTAATTTCACT26255853ACTCATCACCACAGAAGCGAAACTTTCAAGAGACGTGCGTGCTGAAGTTG
Malus domestica genome assembly, chromosome: 7.
OU744997.1:31608652-31608671
ATGCTTTGTGATCAATAAGTTAATTTCGCT31608652ACTCATCACCACAGAAGCGAAACTTTCAAGAAACGTACGTGCTGAAATTG
Nitrospirales bacterium isolate 78038947-5669-4080-b1cf-e9f6117fe586 genome assembly, chromosome: 2.
OY820906.1:1185192-1185211
CCTCTCCCCATCGCATACTTTTGAGTGCTA1185192TCGCTTCTGTGGTGATGAGTGCCATAAAATTTCTAGCAGGATGTTGGAAA
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:4013714-4013733
CAATTTCAGCACGTACGTTTCTTGAAAGTT4013714TCGCTTCTGTGGTGATGAGTAGCGAAATTAACTTATTGATCACAAAGCAT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4357426-4357445
CAACTTCAGCACGCACGTCTCGTGAAAGTT4357426TCGCTTCTGTGGTGATGAGTAGTGAAATTAACTTATCAATCACAAAGCAT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3320682-3320701
CAACTTCAGCACGCACGTCTCTTGAAAGTT3320682TCGCTTCTGTGGTGATGAGTAGTGAAATTAACTTATCGATCACAAAGCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTCATCACCACAGAAGCGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCATCACCACAGAAGCGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCATCACCACAGAAGCGA&k=0&no_gap=0&offset=0&limit=50
0.183 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=TCGCTTCTGTGGTGATGAGT&k=0&no_gap=0&offset=0&limit=29
0.185 | 0.003 | cgi_end;

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