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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 05:52:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-3289 Pericarp Coffea canephora cDNA clone cccp12a14 5', mRNA sequence.
DV665695.1:22-44
CTGGCGGTGGCATTACGGTGG22AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CGN-21753 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w28m5 5', mRNA sequence.
DV682112.1:58-80
GCGGCCCAGCTGGCGGTGGCATTACGGTGG58AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CGN-22064 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w30i21 5', mRNA sequence.
DV682309.1:117-139
GCGGCCCAGCTGGCGGTGGCATTACGGTGG117AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CGN-34054 Leaf Coffea canephora cDNA clone cccl13l10 5', mRNA sequence.
DV690605.1:123-145
GCGGCCCAGCTGGCGGTGGCATTACGGTGG123AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CGN-51380 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w3h9 5', mRNA sequence.
DV704557.1:155-177
GCGGCCCATCTGGCGGTGGCATTACGGTGG155AAACCACAACATCCCCCAAGAGTGTCAACGGCCAGAATTCTTCGTCTCCAAAA
CGN-54417 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w21o4 5', mRNA sequence.
DV706868.1:129-151
GCGGCCCAGCTGGCGGTGGCATTACGGTGG129AAACCACAACATCCCCCAAGAGTGTCAACGGCCAGAATTCTTCGTCTCCAAAA
CC-F01_002_F23 Cherry of different development stage Coffea canephora cDNA clone CC-F01_002_F23, mRNA sequence.
EE195840.1:82-104
GCGGCCCAGCTGGCGGTGGCATTACGGTGG82AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CC-F01_003_B17 Cherry of different development stage Coffea canephora cDNA clone CC-F01_003_B17, mRNA sequence.
EE196045.1:116-138
GCGGCCCAGCTGGCGGTGGCATTACGGTGG116AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-74058 CACAT36FL Coffea arabica cDNA clone CACAT36FL_44_I14_217.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4258512
GR982098.1:65-87
GCGGCCCAGCTGGCGGTGGCATTACGGTGG65AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-83220 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q2_06_E12_181.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4
GR984558.1:276-298
GCGGCCCAGCTGGCGGTGGCATTACGGTGG276AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-83438 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q2_08_O22_351.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4
GR984674.1:101-123
GCGGCCCAGCTGGCGGTGGCATCACGGTGG101AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-83759 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q3_01_03C01.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-425
GR984832.1:106-128
GCGGCCCAGCTGGCGGTGGCATTACGGTGG106AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-84567 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q3_11_23G03.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-425
GR985248.1:106-128
GCGGCCCAGCTGGCGGTGGCATTACGGTGG106AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-98722 CACAT45FR Coffea arabica cDNA clone CACAT45FR_18_G16_247.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4258512
GR989981.1:132-154
GCGGGCCAGCTGGCGGTGGCATTACGGTGG132AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-110870 CarCTFrHh24FL Coffea arabica cDNA clone CarCTFrHh24FL_Q1_08_K11_171.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258
GR991508.1:101-123
GCGGCCCAGCTGGCGGTGGCATTACGGTGG101AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-111123 CarCTFrHh24FL Coffea arabica cDNA clone CarCTFrHh24FL_Q2_03_I02_025.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258
GR991633.1:131-153
GCGGCCCAGCTGGCGGTGGCATCACGGTGG131AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-111840 CarCTFrHh24FL Coffea arabica cDNA clone CarCTFrHh24FL_Q3_03_J07_106.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258
GR991972.1:101-123
GCGGCCCAGCTGGCGGTGGCATCACGGTGG101AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-243128 CACAT36FR26 Coffea arabica cDNA clone CACAT36FR26-CAFRC02TV, mRNA sequence.
GT010556.1:101-123
GCGGCCCAGCTGGCGGTGGCATTACGGTGG101AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-245088 CACAT36FR26 Coffea arabica cDNA clone CACAT36FR26_Q3_02_D07_100.F similar to Genomic DNA, chromosome 3, P1 clone: MJH23 - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT011492.1:101-123
GCGGCCCAGCTGGCGGTGGCATCACGGTGG101AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-253425 CAET1425FR28 Coffea arabica cDNA clone CAET1425FR28-CAET921TV, mRNA sequence.
GT013816.1:106-128
GCGGCCCAGCTGGCGGTGGCATTACGGTGG106AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-259090 CAET87R Coffea arabica cDNA clone CAET87R_Q2_03_I16_249.F, mRNA sequence.
GT016015.1:106-128
GCGGCCCAGCTGGCGGTGGCATTACGGTGG106AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-259273 CAET87R Coffea arabica cDNA clone CAET87R_Q3_02_J23_362.F, mRNA sequence.
GT016089.1:104-126
GCGGCCCAGCTGGCGGTGGCATTACGGTGG104AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
TransId-262079 CAHT1343PER Coffea arabica cDNA clone CAHT1343PER_Q1_03_G09_135.F, mRNA sequence.
GT016940.1:143-165
GCGGCCCAGCTGGCGGTGGCATTACGGTGG143AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CR00-XX-FV2-003-F01-EM.F Coffea racemosa FV2 Coffea racemosa cDNA clone CR00-XX-FV2-003-F01-EM, mRNA sequence.
GT666559.1:84-106
GCGGCCCAGCTGGCGGTGGCATTACGGTGG84AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CA00-XX-PA1-020-D06-EC.F Coffea arabica PA1 Coffea arabica cDNA clone CA00-XX-PA1-020-D06-EC, mRNA sequence.
GT684412.1:58-80
GCGGCCCAGCTGGCGGTGGCATTACGGTGG58AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
CA00-XX-FB4-003-A12-JM.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-003-A12-JM, mRNA sequence.
GT713478.1:115-137
GCGGCCCAGCTGGCGGTGGCATTACGGTGG115AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA
Coffea canephora microsatellite ES1 sequence.
DQ778713.1:116-138
GCGGCCCAGCTGGCGGTGGCATTACGGTGG116AAACCACAACATCCCCCAAGAGTGCCAACGGCCAGAATTCTTCGTCTCCAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTCTTGGGGGATGTTGTGGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCTTGGGGGATGTTGTGGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCTTGGGGGATGTTGTGGTTT&k=0&no_gap=0&offset=0&limit=50
2.197 | 2.100 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCACAACATCCCCCAAGAGT&k=0&no_gap=0&offset=0&limit=50
2.215 | 0.018 | cgi_end;

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