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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 07:39:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Acomys russatus genome assembly, chromosome: 4.
LR877215.1:6016181-6016200
ACCACCACGGGCCACTGGCCCCCATCCTAC6016181AGCTTCAGAGGAACAGTGAAGACCATCCCAGAGCCATCACTCCCAAAGAC
Micromys minutus genome assembly, chromosome: 23.
OZ004803.1:22506412-22506431
TTTGAGCATTACCAAGACTTTGAACAGTCA22506412AGCTTCAGAGGAACAGTGAAACTTCTAGAATGTTTTACACTTTTTGTATG
Aquila chrysaetos chrysaetos genome assembly, chromosome: 17.
LR606197.1:22809868-22809887
GGATCCTTGGTTGTCTGCTCACAAGGTTCC22809868AGCTTCAGAGGAACAGTGAAACTGAGGAGTAATTCTCAAGTGGGGATGCA
Aquila chrysaetos chrysaetos genome assembly, chromosome: 17.
LR606197.1:28021240-28021259
CAATCACTTATTGTGTGAAGGACCTGAGAT28021240AGCTTCAGAGGAACAGTGAAAATGTCTTTAAAGATCTGCTGGAAGGCTGC
Caprimulgus europaeus genome assembly, chromosome: 5.
OU015528.1:59802794-59802813
GGAGGGATCCTTGATTGTCTTCTCACAACC59802794AGCTTCAGAGGAACAGTGAAACTCAGGAGCACTTCTCAAATGGGGATGCA
Haliaeetus albicilla genome assembly, chromosome: 19.
OX381656.1:22553121-22553140
GGATCCTTGGTTGTCTGCTCACAAGGTTCC22553121AGCTTCAGAGGAACAGTGAAACTCAGGACAATTCTCGAGTGGGGATGCAC
Phalacrocorax aristotelis genome assembly, chromosome: 1.
OX451222.1:136439242-136439261
GGATCCTTGGTTGTCCACACACAAAGTTCC136439242AGCTTCAGAGGAACAGTGAAACTCAGGAGCAATTCTTAAGTGGGGATGAA
Somateria mollissima genome assembly, chromosome: 1.
OX598302.1:125050433-125050452
GGATCCTTGATCATGTGTTCTGAAGGTTTG125050433AGCTTCAGAGGAACAGTGAAACTCAGAGGCACTTACCAAGTGCAGCACAA
Somateria mollissima genome assembly, chromosome: 1.
OX598690.1:126925988-126926007
GGATCCTTGATCGTGTGTTCTGAAGGTTTG126925988AGCTTCAGAGGAACAGTGAAACTCAGAGGCACTTACCAAGTGCAGCACAA
Anas acuta genome assembly, chromosome: 1.
OZ009962.1:126622585-126622604
GGATCCTTGATCATGTGTTCTGAAGGTTTG126622585AGCTTCAGAGGAACAGTGAAACTCAGAAGCACTTACCAAGTGCAGCACAA
Larus fuscus genome assembly, chromosome: 4.
OZ010756.1:3770107-3770126
GCCTGGCTTATGATAGCTCGGGGCAAATGG3770107AGCTTCAGAGGAACAGTGAAAGATCGTATAACCTGCACGGGAGTGTGTTC
EL3277F Brassica embryo library (EL) Brassica napus cDNA clone EL3277 3', mRNA sequence.
CN829075.1:339-358
TCAACCTTCTGCAAACCATTCCCTGAAACT339AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
100b11 longbai no.2 one month old leaves Brassica rapa subsp. pekinensis cDNA, mRNA sequence.
DN960331.1:258-277
TCAACCTTCTGCAAACCATTCCCTGAAACT258AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
212h12 longbai no.2 one month old leaves Brassica rapa subsp. pekinensis cDNA, mRNA sequence.
DN964601.1:394-413
TCAACCTTCTGCAAACCATTCCCTGAAACT394AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
EX2PLCL3_UP_014_C04_17APR2003_014 Brassica napus EX2PLCL3 Brassica napus cDNA 5', mRNA sequence.
EE503254.1:256-275
TCAACCTTCTGCAAACCATTCCCTGAAACT256AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
BNZB_UP_166_H06_29SEP2005_034 Brassica napus BNZB Brassica napus cDNA 5', mRNA sequence.
EE568675.1:503-522
TCAACCTTCTGCAAACCATTCCCTGAAACT503AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
OL1978F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL1978, mRNA sequence.
EH415694.1:427-446
TCAACCTTCTGCAAACCATTCCCTGAAACT427AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
OL6865F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6865, mRNA sequence.
EH425109.1:403-422
TCAACCTTCTGCAAACCATTCCCTGAAACT403AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
OL6873F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6873, mRNA sequence.
EH425123.1:434-453
TCAACCTTCTGCAAACCATTCCCTGAAACT434AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
OL8042F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8042, mRNA sequence.
EH427248.1:413-432
TCAACCTTCTGCAAACCATTCCCTGAAACT413AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0188441 Brassica napus Apical meristem Brassica napus cDNA, mRNA sequence.
EV091746.1:595-614
TCAACCTTCTGCAAACCATTCCCTGAAACT595AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0183593 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV103290.1:492-511
TCAACCTTCTGCAAACCATTCCCTGAAACT492AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0110686 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV105374.1:471-490
TCAACCTTCTGCAAACCATTCCCTGAAACT471AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0116766 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV111454.1:437-456
TCAACCTTCTGCAAACCATTCCCTGAAACT437AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0196689 Brassica napus Stem library Brassica napus cDNA, mRNA sequence.
EV127762.1:419-438
TCAACCTTCTGCAAACCATTCCCTGAAACT419AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0166760 Brassica napus Flower Brassica napus cDNA, mRNA sequence.
EV132792.1:460-479
TCAACCTTCTGCAAACCATTCCCTGAAACT460AGCTTCAGAGGAACAGTGAAAGCGGACGCGTGGGTCGACCCGGGAATTCC
0212537 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV146603.1:434-453
TCAACCTTCTGCAAACCATTCCCTGAAACT434AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0160431 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV175062.1:342-361
TCAACCTTCTGCAAACCATTCCCTGAAACT342AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0184956 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV213135.1:442-461
TCAACCTTCTGCAAACCATTCCCTGAAACT442AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
0186128 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV214307.1:476-495
TCAACCTTCTGCAAACCATTCCCTGAAACT476AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
BR104366 defected leaf cDNA library KHLD Brassica rapa subsp. pekinensis cDNA clone KHLD-09C07 3', mRNA sequence.
EX120536.1:482-501
TCAACCTTCTGCAAACCATTCCCTGAAACT482AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF01M14, 3'-end sequence.
FY068661.1:468-487
TCAACCTTCTGCAAACCATTCCCTGAAACT468AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF03G15, 3'-end sequence.
FY069229.1:441-460
TCAACCTTCTGCAAACCATTCCCTGAAACT441AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF05I03, 3'-end sequence.
FY069950.1:426-445
TCAACCTTCTGCAAACCATTCCCTGAAACT426AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF07J13, 3'-end sequence.
FY070677.1:430-449
TCAACCTTCTGCAAACCATTCCCTGAAACT430AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF12D02, 3'-end sequence.
FY072309.1:498-517
TCAACCTTCTGCAAACCATTCCCTGAAACT498AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF32O01, 3'-end sequence.
FY423806.1:467-486
TCAACCTTCTGCAAACCATTCCCTGAAACT467AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF35D04, 3'-end sequence.
FY424603.1:472-491
TCAACCTTCTGCAAACCATTCCCTGAAACT472AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF36E17, 3'-end sequence.
FY424979.1:456-475
TCAACCTTCTGCAAACCATTCCCTGAAACT456AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF38O24, 3'-end sequence.
FY425918.1:469-488
TCAACCTTCTGCAAACCATTCCCTGAAACT469AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_1704.
FX771498.1:199-218
TCAACCTTCTGCAAACCATTCCCTGAAACT199AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB037A09, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC189328.2:63668-63687
TGAGGAAAAATGAACCGGTCACCTGAAACT63668AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:656396-656415
TGAGGAAAAATGAACCGGTCACCTGAAACT656396AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica napus genome assembly, chromosome: A09.
HG994363.1:175558-175577
TGAGGAAAAATGAACCGGTCACCTGAAACT175558AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica napus genome assembly, chromosome: C09.
HG994373.1:420193-420212
TGAGGAAAAATGAACCGGTCACCTGAAACT420193AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa genome, scaffold: A09.
LR031568.1:454224-454243
TGAGGAAAAATGAACCGGTCACCTGAAACT454224AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:434982-435001
TGAGGAAAAATGAACCGGTCACCTGAAACT434982AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:560118-560137
TGAGGAAAAATGAACCGGTCACCTGAAACT560118AGCTTCAGAGGAACAGTGAAAGATGATCGACCAAAAGAGCGAGGAGGCAG
Anas platyrhynchos genome assembly, chromosome: 1.
LS423611.1:76944683-76944702
TTGTGCTGCACTTGGTAAGTGCTTCTGAGT76944683TTCACTGTTCCTCTGAAGCTCAAACCTTCAGAACACATGATCAAGGATCC
Phalacrocorax carbo genome assembly, chromosome: 1.
OY997601.1:82666289-82666308
TTCATCCCCACTTAAGAATTGCTCCTGAGT82666289TTCACTGTTCCTCTGAAGCTGGAACTTTTGTTGTGGACAACCAAGGATCC
MB75-8A PZ204.BNlib Brassica napus cDNA clone pMB75-8A 5' similar to unknown protein linked tail to tail to hexokinase cDNA|Arabidopsis thaliana|U19925, mRNA sequence.
AI352969.1:152-171
CTGCCTCCTCGCTCTTTTGGTCGATCATCT152TTCACTGTTCCTCTGAAGCTAGTTTCAGGGAATGGTTTGCAGAAGGTTGA
Brassica rapa subsp. pekinensis flower bud partial sequence, clone:RF0521.
AT002175.1:132-151
GCTGCCTCCTCGTCCACCGGTCGATCATCT132TTCACTGTTCCTCTGAAGCTAGTTTCAGGGAATGGTTTGCAGAAGGTTGA
TSA: Lytechinus variegatus isotig20066.Lvarbgast mRNA sequence.
JI432795.1:249-268
GATGTACAGGCATGTTCATACTTTACGTCT249TTCACTGTTCCTCTGAAGCTTCATTGCCGTAATATAGATCCAATGGGAGA
BOGJY63TF BOGJ Brassica oleracea genomic clone BOGJY63, genomic survey sequence.
BH515782.1:291-310
CTGCCTCCTCGCTCTTTTGGTCGATCATCT291TTCACTGTTCCTCTGAAGCTAGTTTCAGGTGACCGGTTCATTTTTCCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCTTCAGAGGAACAGTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTTCAGAGGAACAGTGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
2.209 | 2.201 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTTCAGAGGAACAGTGAA&k=0&no_gap=0&offset=0&limit=50
2.395 | 0.186 | search_minus_done; http://172.18.8.135:50400/match?q=TTCACTGTTCCTCTGAAGCT&k=0&no_gap=0&offset=0&limit=2
2.399 | 0.004 | cgi_end;

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