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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-07 03:19:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:844804-844823
GGATCGCTGCCTCGATCCTTCTCTCCCCGG844804AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:837642-837661
GGATCGCTGCCTCGATCCTTCTCTCCCCGG837642AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:836018-836037
GGATCGCTGCCTCGATCCTTCTCTCCCCGG836018AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:858086-858105
GAATCGCTGCCTCGATCCTTCTCTCCCCGG858086AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Seq_ct_323 MAMB Musa acuminata subsp. malaccensis genomic, genomic survey sequence.
HN238580.1:616-635
AGAGGGCCGAGGCGGCGATGTCGAGGTCGC616TCTGAAGTCGGAGTTTGCCTCCGGGGAGAGAAGGATCGAGGCAGCGATCC
Musa troglodytarum cultivar karat chromosome 3.
CP097505.1:635008-635027
AGAGGGCCGAGGCGGCGATGTCGAGGTCGC635008TCTGAAGTCGGAGTTTGCCTCCGGGGAGGGAAGGATCGAGGCAACGATCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGCAAACTCCGACTTCAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGCAAACTCCGACTTCAGA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=AGGCAAACTCCGACTTCAGA&k=0&no_gap=0&offset=0&limit=50
0.162 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGAAGTCGGAGTTTGCCT&k=0&no_gap=0&offset=0&limit=46
0.163 | 0.001 | cgi_end;

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