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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-05 07:34:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BOGTT40TF BOGT Brassica oleracea genomic clone BOGTT40, genomic survey sequence.
BH502161.1:189-208
TAGGGTTTTCAGATCTCTCTGGAACTTTGC189AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGGGGGAGGCTCC
BOHSK22TR BOHS Brassica oleracea genomic clone BOHSK22, genomic survey sequence.
BH558666.1:388-407
TGGGGTTTTCAGATCTCTCTGGAACTCTAC388AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGGAGGATGCTCC
BOMEX77TR BO_2_3_KB Brassica oleracea genomic clone BOMEX77, genomic survey sequence.
BH704534.1:20-39
GATCTCTCTGGAACTCTGC20AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAGAGAAGGGGATGACTTC
odg94g09.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH956151.1:537-556
TAGGGTTTTCAAATCTCTCTGGAACTCTGC537AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAGAAGGAGGCTCC
lle28b05.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ084566.1:50-69
CTGTGGTGGAATCTCTCTCTGGAACTTTGC50AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGGGGGAGGCTCC
BONRK48TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BONRK48, genomic survey sequence.
BZ455171.1:641-660
TAGGGTTTTCAAATCTCTCTGGAACTCTGC641AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAATAAGAAGAAGACTCC
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 134 unordered pieces.
FJ789657.1:172515-172534
GCTAGGGTTTTCAAATCTCTGGAACTCTGC172515AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAAGAGGAGACTCC
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:28941738-28941757
TAGGGTTTTCAAATCTCTCTGAAACTCTGC28941738AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAGGAGGAGGCTCC
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:28943559-28943578
TAGGGTTTTCAAATCTCTCTGAAACTCTGT28943559AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAGGAGGAGGCTCC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:34251187-34251206
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34251187AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAAGAGAAGGAGACGGCTCC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:34252907-34252926
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34252907AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAATAGAAGGAGGCTGCTCC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:42557456-42557475
TAGGGTTTTCAGATCTCTCTTGAATTCGGC42557456AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGGGGATGACTTC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:42560945-42560964
TAGGGTTTTCAGATCTCTCTTGAATTCGGC42560945AGGGCTTCGCTCTGATTTCTAAATCGGAGAGAAGAGAAAGGGATGACTTC
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:32070310-32070329
TAGGGTTTTCAAATATCTCTGGAACTCTGC32070310AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAGGAGGAGGCTCC
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:61139959-61139978
TGGGGTTTTTAGATCTCTCTGGAACTCTGC61139959AGGGCTTCGCTCTGATTTCTAAATGGGAGATAAGAGAAGGAGGAGGCTCC
Brassica napus cultivar Xiang5A chromosome 17.
CP123892.1:10916742-10916761
TAGGGTTTTCAAATCTCTCTGGAACTCTGC10916742AGGGCTTCGCTCTGATTTCTAAATGGAAAAGAAAAGAAGGAGGAGGCTCC
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:51766691-51766710
TAGGGTTTTCAGATCTCTCTGGAACTCTGC51766691AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAGAGAAGGGGATGACTTC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:34316838-34316857
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34316838AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAAGAGAAGGAGACGGCTCC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:34318548-34318567
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34318548AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAATAGAAGGAGGCTGCTCC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:35788340-35788359
TAGGGTTTTCAGATCTCTCTTGAATTCGGC35788340AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGGGGATGACTTC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:35791797-35791816
TAGGGTTTTCAGATATCTCTTGAATTCGGC35791797AGGGCTTCGCTCTGATTTCTAAATCGGAGAGAAGAGAAAGGGATGACTTC
Brassica napus genome assembly, chromosome: C01.
HG994365.1:13821282-13821301
AGAGAGAGAGAGAAGAGAAAAGAGAAATGC13821282AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAAAAAAGGATGCTCCT
Brassica napus genome assembly, chromosome: C07.
HG994371.1:1839392-1839411
TAGGGTTTTCAGAGCTCTCTGAAACTCGGC1839392AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGAAGGAGGCTCT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:3887542-3887561
TAGGGTTTTCAAATCTCTCTGGAACTCTGC3887542AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAGAGAAGGAGGAGACTTC
Brassica rapa genome, scaffold: A03.
LR031572.1:34189931-34189950
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34189931AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAAGAGAAGGAGACGGCTCC
Brassica rapa genome, scaffold: A03.
LR031572.1:34191635-34191654
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34191635AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAATAGAAGGAGGCTGCTCC
Brassica rapa genome, scaffold: A08.
LR031575.1:1249023-1249042
TAGGGTTTTCAAATCTCTCTGAAACTCTGC1249023AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAGGAGGAGGCTCC
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:3957709-3957728
TAGGGTTTTCAAATCTCTCTGGAACTCTGC3957709AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAGAGAAGGAGGAGACTTC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:34288818-34288837
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34288818AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAAGAGAAGGAGACGGCTCC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:34290518-34290537
TAGGGTTTTCAGATCTCTCTGGAACTCGGC34290518AGGGCTTCGCTCTGATTTCTAAATGGGTGAGAATAGAAGGAGGCTGCTCC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:37053464-37053483
TAGGGTTTTCAGATCTCTCTTGAATTCGGC37053464AGGGCTTCGCTCTGATTTCTAAATGGGAGAGAAGAGAAGGGGATGACTTC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:37056925-37056944
TAGGGTTTTCAGATCTCTCTTGAATTCGGC37056925AGGGCTTCGCTCTGATTTCTAAATCGGAGAGAAGAGAAAGGGATGACTTC
Brassica rapa genome assembly, chromosome: A08.
LS974624.2:1267203-1267222
TAGGGTTTTCAAATCTCTCTGAAACTCTGC1267203AGGGCTTCGCTCTGATTTCTAAATGGAAGAGAAAAGAAGGAGGAGGCTCC
BOGJL79TR BOGJ Brassica oleracea genomic clone BOGJL79, genomic survey sequence.
BH424163.1:178-197
GAAGTCTCCTCCTTCTCTTCTCTTCCATTT178AGAAATCAGAGCGAAGCCCTGCATAGTTCCAGAGAGATTTAAAAACCCTA
BOGWS96TR BOGW Brassica oleracea genomic clone BOGWS96, genomic survey sequence.
BH472860.1:506-525
GGAGTCTTCTTCTTATTTTCTCTTCCATTT506AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATTTGAAAACCCTA
BOMDT35TF BO_2_3_KB Brassica oleracea genomic clone BOMDT35, genomic survey sequence.
BH668728.1:424-443
TGAGCCTCCTCCTTCTCTTCTCTCCCATTT424AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGATATCTGAAAACCCCA
jnr70e10.g1 B.oleracea001 Brassica oleracea genomic, genomic survey sequence.
BZ052171.1:147-166
TGAGCCTCCTCCTTCTCTTCTCTCCCATTT147AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGATATCTGAAAACCCCA
BONFE36TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONFE36, genomic survey sequence.
BZ438239.1:107-126
GGAGCCTCCTTCTTCTTTTCTCTTCCATTT107AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATTTGAAAACCCTA
BONFE44TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONFE44, genomic survey sequence.
BZ460523.1:126-145
GGAGCCTCCTTCTTCTTTTCTCTTCCATTT126AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATTTGAAAACCCTA
BOMQY86TR BO_2_3_KB Brassica oleracea genomic clone BOMQY86, genomic survey sequence.
BZ512613.1:161-180
GGAGCCTCCCCCTTCTATTCTCTCCCATTT161AGAAATCAGAGCGAAGCCCTACAGAGTTCCAGAGAGATCTGAAAACCCTA
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:26084545-26084564
GGAGCCTCCCCCTTCTATTCTCTCCCATTT26084545AGAAATCAGAGCGAAGCCCTACAGAGTTCCAGAGAGATCTGAAAACCCTA
Brassica napus cultivar Xiang5A chromosome 13.
CP123888.1:42729939-42729958
AGGAGCATCCTTTTTTTTTCTCTTCCATTT42729939AGAAATCAGAGCGAAGCCCTGCATTTCTCTTTTCTCTTCTCTCTCTCTCT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:50667006-50667025
GAAGTCTCCTCCTTCTCTTCTCTTCCATTT50667006AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATTTGAAAACCCTA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:59914631-59914650
AGAGCCTCCTTCTTCTCTTCTCTCCCATTT59914631AGAAATCAGAGCGAAGCCCTGCCGAGTTTCAGAGAGCTCTGAAAACCCTA
Brassica napus genome assembly, chromosome: A07.
HG994361.1:1906886-1906905
AAAGTCATCCACTTTTCTTCTCTCCCATTT1906886AGAAATCAGAGCGAAGCCCTACAGAGTTCCAGAGAGATCTGTAAATCCTA
Brassica napus genome assembly, chromosome: C07.
HG994371.1:10030620-10030639
GAAGTCATCCCCTTCTCTTCTCTTCCATTT10030620AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATCTGAAAACCCTA
Brassica napus genome assembly, chromosome: C09.
HG994373.1:7956708-7956727
GGAGCCTCCTCCTTCTCTTATCTCCCATTT7956708AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATCTAAAAACCCCA
Brassica rapa genome, scaffold: A06.
LR031569.1:12718505-12718524
GGAGTCTCCTCTTTCTTTTCTCTTCCATTT12718505AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGATTTGAAAACCCTAGC
Brassica rapa genome, scaffold: A01.
LR031571.1:20644061-20644080
GAAGTCATCCCTTTCTCTTCTCTCCGATTT20644061AGAAATCAGAGCGAAGCCCTGCCGAATTCAAGAGAGATCTGAAAACCCTA
Brassica rapa genome, scaffold: A01.
LR031571.1:20647504-20647523
GAAGTCATCCCCTTCTCTTCTCTCCCATTT20647504AGAAATCAGAGCGAAGCCCTGCCGAATTCAAGAGAGATCTGAAAACCCTA
Brassica rapa genome, scaffold: A07.
LR031574.1:1897075-1897094
AAAGTCATCCACTTTTCTTCTCTCCCATTT1897075AGAAATCAGAGCGAAGCCCTACAGAGTTCCAGAGAGATCTGTAAATCCTA
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:1036347-1036366
GGAGCCTCCTTCATCTTTTCTCTTCCATTT1036347AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATTTGAAAACCCTA
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:37058835-37058854
GGAGCCTCCTCCTTCTCTTCTCTCCCATTT37058835AGAAATCAGAGCGAAGCCCTGCAAAGATCCAGAGAGATCTGAAAACCCTA
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:7956652-7956671
GGAGCATCCTCCTTCTCTTCTCTCCCATTT7956652AGAAATCAGAGCGAAGCCCTGTAGAGTTCCAGAGAGATCTGAAAACCCCA
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:7958879-7958898
TGAGCCTCCTCCTTCTCTTCTCTCCCATTT7958879AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGATATCTGAAAACCCCA
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:11330184-11330203
GAAGTCATCCCCTTCTCTTCTCTTCCATTT11330184AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATCTGAAAACCCTA
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:19905671-19905690
GGAGTCTTCTTCTTATTTTCTCTTCCATTT19905671AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGAGATTTGAAAACCCTA
Brassica rapa genome assembly, chromosome: A06.
LS974622.2:13567466-13567485
GGAGTCTCCTCTTTCTTTTCTCTTCCATTT13567466AGAAATCAGAGCGAAGCCCTGCAGAGTTCCAGAGATTTGAAAACCCTAGC
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:1907919-1907938
AAAGTCATCCACTTTTCTTCTCTCCCATTT1907919AGAAATCAGAGCGAAGCCCTACAGAGTTCCAGAGAGATCTGTAAATCCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGGCTTCGCTCTGATTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGGCTTCGCTCTGATTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.177 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=AGGGCTTCGCTCTGATTTCT&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.181 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAATCAGAGCGAAGCCCT&k=0&no_gap=0&offset=0&limit=17
0.376 | 0.017 | cgi_end;

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