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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 13:55:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Electrona antarctica genome assembly, chromosome: 9.
OX578254.1:45051318-45051337
GCAGAACTCCATGCATCAACATAAGAAATG45051318AGTCCCAAGTCCCAACTCAATCATCAAACTTAATCAGGTCAAAAGACTGC
Arachis hypogaea EST, cultivar Minhua6, clone GFBZZHF01EWG7Q.
LN664059.1:227-246
TTTCCTTAACAAATACATACTTGAATAGTT227AGTCCCAAGTCCCAACTCAACTCAGCTCTCAGCAATTAATTAATTAACCA
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:124496287-124496306
TTTCCTTAACAAATACATACTTGAATAGTT124496287AGTCCCAAGTCCCAACTCAACTCAGCTCTCAGCAATTAATTAATTAAACC
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:126215637-126215656
TGCACTTGACAAATACATACTTGAATAGTT126215637AGTCCCAAGTCCCAACTCAACTCAGCTCTCAGCAATTAATTAATTAAACC
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:123975444-123975463
TGCACTTGACAAATACATACTTGAATAGTT123975444AGTCCCAAGTCCCAACTCAACTCAGCTCTCAGCAATTAATTAATTAAACC
Quercus variabilis isolate HB chromosome 4a.
CP129448.1:32514851-32514870
AATTAAGCTTTAAAAGGCATAGAAAATCTC32514851AGTCCCAAGTCCCAACTCAATGAAGAACTCATTAGGTAACTCAAACATGC
Quercus variabilis isolate HB chromosome 4a.
CP129448.1:32779879-32779898
AATTAAGCTTTAAAAGGCATAGAAAATCTC32779879AGTCCCAAGTCCCAACTCAATGAAGAACTAATTAGGTAACTCAAACATGC
Plebejus argus genome assembly, chromosome: 17.
FR989943.1:8627566-8627585
ATTTGATTTGATTATGTAACACCAGCTATC8627566AGTCCCAAGTCCCAACTCAACTATTTTGATGATCCATTAATTATTGAGCC
Glaucopsyche alexis genome assembly, chromosome: 21.
FR990063.1:6083101-6083120
GACGTTCCGGATTCTGTAGGGTGTTACTAT6083101AGTCCCAAGTCCCAACTCAAAGCCTTAGACTAAAACCCCCTCACTAATAA
Aricia agestis genome assembly, chromosome: 3.
LR990259.1:22685555-22685574
CACGGCCCGCACGGGTCATATTATTATTAT22685555AGTCCCAAGTCCCAACTCAACAAGCATTCCGGGGTTACCCGCTGACCGCA
Acleris sparsana genome assembly, chromosome: 26.
OV281311.1:11089125-11089144
AACGACAGATACTGCTAATTATTGCGAAAC11089125AGTCCCAAGTCCCAACTCAATTTGTGCGGGCTGTGACACCAACGTTTGGT
Polyommatus icarus genome assembly, chromosome: 2.
OW569322.1:26354329-26354348
TTCTCCGCTCCGCATCACGGGTCATATTAT26354329AGTCCCAAGTCCCAACTCAACAAGCATTCCGGGGTTACATGCTGACCGCA
Acrobasis suavella genome assembly, chromosome: 20.
OW971948.1:7555420-7555439
GATGAAGTGCTCGTCAGAACAAATCAAACG7555420AGTCCCAAGTCCCAACTCAATAGTGTTATGTTGTTTTATTACCGAGCTAT
Aricia agestis genome assembly, chromosome: 3.
OX101762.1:22919335-22919354
CACGGCCCGCACGGGTCATATTATTATTAT22919335AGTCCCAAGTCCCAACTCAACAAGCATTCCGGGGTTACCCGCTGACCGCA
Luffia ferchaultella genome assembly, chromosome: 3.
OX453242.1:17333800-17333819
TATTTCCCAGAGTTTATGATTTGGCTATGC17333800AGTCCCAAGTCCCAACTCAAAAATTCACCTGTGTATACATTTTAGCTTTC
Melanostoma scalare genome assembly, chromosome: 3.
OX456986.1:22936573-22936592
GGTTATGATGTGAGCATGAGCACCCTCCCA22936573AGTCCCAAGTCCCAACTCAAGCAGTATCAAAAACAGCGCCATGATAAAAT
Dicyrtomina minuta genome assembly, chromosome: 2.
OX461810.1:48736666-48736685
AAAATTCAAACACTCACACTCAACTAACAA48736666AGTCCCAAGTCCCAACTCAAAAAAATCAAAATCAAAGTTCAACTCTCAAT
Polyommatus iphigenia genome assembly, chromosome: 11.
OY730188.1:11012369-11012388
CTTTTCTCCGCTCCGCATCACGGGTCATAT11012369AGTCCCAAGTCCCAACTCAACAAGCATTCCGGGGTTACCCGCTGACCGCG
Thalassophryne amazonica genome assembly, chromosome: 7.
LR722972.1:35567537-35567556
ACCACCAATTGGTGCAAGCTGACTTGAGAC35567537TTGAGTTGGGACTTGGGACTTGAGACTTGTCGATTCACGACTTGACAGTG
Protomyctophum bolini genome assembly, chromosome: 2.
OZ001267.1:30978662-30978681
GCAGTCTTTTGACCTGATTAAGTCCGATGA30978662TTGAGTTGGGACTTGGGACTCATTTCTTATGTTGATGCATGGAGTTCTGC
Arachis hypogaea DNA, clone: 8iHA00A43, cultivar: YI-0311.
DE998455.1:530-549
ACCTTAATTAATTAATTGCTGAGAGCTGAG530TTGAGTTGGGACTTGGGACTAACTATTCAAGTATGTATTTGTTAAGGAAA
TOG908531_1 Arachis duranensis Grif 15036 (Dur2-1) STS genomic PCR amplicon Arachis duranensis STS genomic, sequence tagged site.
GF111786.1:393-412
GGTTTAATTAATTAATTGCTGAAAGCTGAG393TTGAGTTGGGACTTGGGACTAACTATTCAAGTATGTATTTGTTAAGGAAA
Cenchrus purpureus cultivar elephant grass chromosome A7.
CP053460.1:62738791-62738810
CTCCCCTCTCCTGCCGCCTGGGCAGCAGCT62738791TTGAGTTGGGACTTGGGACTTGGATTGGGATCTCAAGATGCCGGTCTCCT
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 6.
CP094636.1:5617960-5617979
GAGACACACACTAAAACAGTCAAACCCTTG5617960TTGAGTTGGGACTTGGGACTTTACTCAACTTGGGCTGAGCATGTGCATCG
Camelina sativa cultivar CO46 chromosome 2.
CP131550.1:4001744-4001763
GAGACACACACTCAAACAGTCAAACCCTTG4001744TTGAGTTGGGACTTGGGACTTTACTCAACTTGGGCCTTAATGGGCTGGCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR824636.1:569386788-569386807
TCAGAGAAAAACATGGTACTTCTTAGGCGA569386788TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828119.1:555645176-555645195
TCAGAGAAAAACATGGTACTTCTTAGGCGA555645176TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828164.1:571790596-571790615
TCAGAGAAAAACATGGTACTTCTTAGGCGA571790596TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828192.1:563859073-563859092
TCAGAGAAAAACATGGTACTTCTTAGGCGA563859073TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Digitaria exilis genome assembly, chromosome: 8A.
LR994618.1:26556272-26556291
GTAGTATCCATGACATGGCATAGACACCAC26556272TTGAGTTGGGACTTGGGACTGCCCTCATTGTGTTTTATGGGATTTGACAA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:20526902-20526921
AACATATCACCCTTGCAACTCCAGAACCAG20526902TTGAGTTGGGACTTGGGACTTGCATATATAGATAAGCTGAGTATGAATCA
Quercus robur genome assembly, chromosome: 4.
OW028768.1:56198979-56198998
GCATGTTTGAGTTACCTAATTAGTTCTTCG56198979TTGAGTTGGGACTTGGGACTGAGATTTTCTATGCTTTTTAAAGCTTAATT
Thuidium tamariscinum genome assembly, chromosome: 9.
OX344757.1:4394715-4394734
ATTTGTGGATGTCCACTCTGGCTTTTGTAC4394715TTGAGTTGGGACTTGGGACTCAAAGCATATAGGGTGATCCAATGGACACG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459906.1:561538938-561538957
TCAGAGAAAAACATGGTACTTCTTAGGCGA561538938TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459981.1:558533643-558533662
TCAGAGAAAAACATGGTACTTCTTAGGCGA558533643TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460009.1:554947236-554947255
TCAGAGAAAAACATGGTACTTCTTAGGCGA554947236TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460051.1:548022945-548022964
TCAGAGAAAAACATGGTACTTCTTAGGCGA548022945TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460142.1:550801036-550801055
TCAGAGAAAAACATGGTACTTCTTAGGCGA550801036TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460247.1:550362289-550362308
TCAGAGAAAAACATGGTACTTCTTAGGCGA550362289TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:548314392-548314411
TCAGAGAAAAACATGGTACTTCTTAGGCGA548314392TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460303.1:552385024-552385043
TCAGAGAAAAACATGGTACTTCTTAGGCGA552385024TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590752.1:566198671-566198690
TCAGAGAAAAACATGGTACTTCTTAGGCGA566198671TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590766.1:551527398-551527417
TCAGAGAAAAACATGGTACTTCTTAGGCGA551527398TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX638753.1:552871441-552871460
TCAGAGAAAAACATGGTACTTCTTAGGCGA552871441TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638802.1:545189082-545189101
TCAGAGAAAAACATGGTACTTCTTAGGCGA545189082TTGAGTTGGGACTTGGGACTACTTGATGAAAACCCTCCTTTCATCGAAAA
Plebejus argus genome assembly, chromosome: 11.
FR989937.1:1815337-1815356
GACTGGGTTAATGGACCATGGAGCTACTTC1815337TTGAGTTGGGACTTGGGACTTCCGACAAGGAACATATTAATTATAATAGT
Glaucopsyche alexis genome assembly, chromosome: 22.
FR990064.1:3817765-3817784
TTTGAAGACACCCCGGAATAAAGGTATTTA3817765TTGAGTTGGGACTTGGGACTGTACATGCACCGGAATCCGGAAGGGACGTA
Erannis defoliaria genome assembly, chromosome: 11.
FR990077.1:17875315-17875334
AACATTTTGTTTCACCCAGCTATTAATGTA17875315TTGAGTTGGGACTTGGGACTTAGGGTACAAATTTCGTTAAATTACTAAAC
Pammene fasciana genome assembly, chromosome: 1.
OU452273.1:26816875-26816894
AAAGATACCCACGATCCGGCACGTTTTATC26816875TTGAGTTGGGACTTGGGACTGTTAATCACTGCTAGACGGCCACTAGACGT
Acleris emargana genome assembly, chromosome: 15.
OV656850.1:15157910-15157929
CTATACCGACGCGACGACCTGGTTAACGGT15157910TTGAGTTGGGACTTGGGACTTCCACAGAGGAGATGGCTCCATCTTTTCCG
Aricia artaxerxes genome assembly, chromosome: 3.
OW569290.1:1746926-1746945
TGCGGTCAGCGGGTAACCCCGGAATGCTTG1746926TTGAGTTGGGACTTGGGACTATAATAATAATATGACCCGTGCGGGCCGTG
Athrips mouffetella genome assembly, chromosome: 7.
OX383963.1:27346085-27346104
CGCGTCAGTAGTGACACTTTGGCATGGTAG27346085TTGAGTTGGGACTTGGGACTTGCGGATGACTGTATGACAAGCTAAAAAAA
Cloeon dipterum genome assembly, chromosome: 2.
OX451260.1:17908005-17908024
TATTCAATGAATTCTATAGTTATGGCGTAT17908005TTGAGTTGGGACTTGGGACTTATTAAACAGTCTGTTGAATAATAAATACA
Polyploca ridens genome assembly, chromosome: 26.
OX596269.1:8338051-8338070
AGTATTTGTTTCTAAAGTCATAAAAATCAA8338051TTGAGTTGGGACTTGGGACTTTCGTTGCTTTACGGCCCCTTTTTTAGGCT
Eupithecia tripunctaria genome assembly, chromosome: 19.
OY041618.1:11974450-11974469
CGTTACGCATAATTTATTACGTCTTCCGGG11974450TTGAGTTGGGACTTGGGACTTTACTCACGCTCGATGCGAAGTCCCTAGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTCCCAAGTCCCAACTCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTCCCAAGTCCCAACTCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.237 | 0.228 | search_plus_done; http://172.18.8.135:50400/match?q=AGTCCCAAGTCCCAACTCAA&k=0&no_gap=0&offset=0&limit=50
0.313 | 0.076 | search_minus_done; http://172.18.8.135:50400/match?q=TTGAGTTGGGACTTGGGACT&k=0&no_gap=0&offset=0&limit=32
0.337 | 0.024 | cgi_end;

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