GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:15:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

ZO__Ed0004O08.r ZO__Ed Zingiber officinale cDNA clone ZO__Ed0004O08 3', mRNA sequence.
DY359661.1:222-241
GCGGCGGCGAAGGCGCCGAAAACGAGGAGA222ATAAGAGTGAGGAAGGGCAAGTACCGCGGCGTGCGGCAGCGGCCGTGGGG
Apodemus sylvaticus genome assembly, chromosome: 1.
OX359297.1:77234213-77234232
GTAGGCCTGGCCCACTATAAGAGGGGCTGC77234213TTGCCCTTCCTCACTCTTATTCTCTCACTCTCTTAGCTTCTCTCTCGCCC
Apodemus sylvaticus genome assembly, chromosome: 4.
OX359300.1:139855079-139855098
ATGTCCTGGACAAGGCAGTTCCAAAGACCA139855079TTGCCCTTCCTCACTCTTATTTAGTGTGCGTGCGTGCGTGTGTGTGTGTG
ZO__Ed0004O08.f ZO__Ed Zingiber officinale cDNA clone ZO__Ed0004O08 5', mRNA sequence.
DY359660.1:385-404
CCCCACGGCCGCTGCCGCACGCCGCGGTAC385TTGCCCTTCCTCACTCTTATTCTCCTCGTTTTCGGCGCCTTCGCCGCCGC
TSA: Cannabis sativa PK03683.1_1.CasaPuKu mRNA sequence.
JP450009.1:82-101
TCAATCTACTCACCAAAAATGAAGAATCAT82TTGCCCTTCCTCACTCTTATGTTTAGCTTCATCATGATCATGATCATGTG
Portevinia maculata genome assembly, chromosome: 2.
OX454526.1:308825035-308825054
AATTTTCTATTATATTTTTGACTAAATGAC308825035TTGCCCTTCCTCACTCTTATGTCGACAGCTGTAATATCTCAAAATTTTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATAAGAGTGAGGAAGGGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAAGAGTGAGGAAGGGCAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.159 | 0.150 | search_plus_done; http://172.18.8.135:50400/match?q=ATAAGAGTGAGGAAGGGCAA&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCCCTTCCTCACTCTTAT&k=0&no_gap=0&offset=0&limit=49
0.268 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).