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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-20 08:50:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scyliorhinus canicula genome assembly, chromosome: 10.
LR744039.1:89876364-89876381
TGCTGAGCCCCTTACCTCACTCACCTGTGA89876364ATCAGTAAGTCTTCGTTGTTGTCTATTGGACAGGTAGGTTCCTCACTG
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:14239827-14239844
CTGCAACGACAGAAGGTATGACAAAACCCA14239827ATCAGTAAGTCTTCGTTGAAAACAACACCAATAACCACTTAGGACGTT
Agrostemma githago genome assembly, chromosome: 23.
OY288261.1:49708668-49708685
TAATAATGTTTAAAATTAAATGTCTGTATT49708668ATCAGTAAGTCTTCGTTGTGACGGGTATATCCGTCACAAGGGTATAAC
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:14239827-14239844
CTGCAACGACAGAAGGTATGACAAAACCCA14239827ATCAGTAAGTCTTCGTTGAAAACAACACCAATAACCACTTAGGACGTT
Melinaea menophilus n. ssp. AW-2005 genome assembly, chromosome: 3.
OU911040.1:5476074-5476091
CTAAAAAATTAAAGATTTTCAGTCAGATTT5476074ATCAGTAAGTCTTCGTTGATGTCTAGACAAAATAAATTGTATATTTTA
Amphimallon solstitiale genome assembly, chromosome: Y.
OY720685.1:922484-922501
CTTGGTCATCGCACCATTTCGGTTGATAAC922484ATCAGTAAGTCTTCGTTGCATCGAGTTTACCAAATTTATACAATACTC
Chloroclystis v-ata genome assembly, chromosome: 1.
OY829895.1:14727186-14727203
TACAGTATGACCATATCAGCTGTTTGCGCG14727186ATCAGTAAGTCTTCGTTGAGTGTCCAGCGGCAACGGGTGATGATTGAC
Schoenobius gigantella genome assembly, chromosome: 21.
OZ012561.1:23756762-23756779
TCCTTATTGCATCTCGCTAATGTTCGACCA23756762ATCAGTAAGTCTTCGTTGAAAGAATGTGCATGCGTTGCAATTTGTTTC
Peromyscus eremicus genome assembly, chromosome: 3.
OX460396.1:34690875-34690892
GCTAAATACAGATATGATGGCATGTGCCAA34690875CAACGAAGACTTACTGATTCATTGATTGAAAATATTGCAAAAAATAAT
Onychomys leucogaster genome assembly, chromosome: 3.
OX460420.1:36964440-36964457
GCTAAATACAGATATGACGGCATGTACCAA36964440CAACGAAGACTTACTGATTCATTGAAAATATTGCAAAAAATAATTATG
Peromyscus eremicus genome assembly, chromosome: 3.
OX460468.1:35254851-35254868
GCTAAATACAGATATGATGGCATGTGCCAA35254851CAACGAAGACTTACTGATTCATTGATTGAAAATACTGCAAAAAATAAT
Medicago truncatula clone mth2-34c9, complete sequence.
AC144504.14:47708-47725
AATCTTCTCAAAAATGAATAAATTAAATTC47708CAACGAAGACTTACTGATATTTATTGACAATGCACCAGCAGCCTGCAC
Marasmius oreades strain 43B chromosome 2.
CP097436.1:2735917-2735934
TGTTAACTCTTGGCCATAACAGTCCTTGCT2735917CAACGAAGACTTACTGATGCTACTCCACCTTCGAGTCAGGAAGTTTTC
Marasmius oreades strain 43A chromosome 2.
CP097447.1:2787750-2787767
TGTTAACTCTTGGCCATAACAGTCCTTGCT2787750CAACGAAGACTTACTGATGCTACTCCACCTTCGAGTCAGGAAGTTTTC
Triticum aestivum genome assembly, chromosome: 2B.
LR862512.1:683857139-683857156
CTACGGATGTTGGTGATTCTTTTCATGACA683857139CAACGAAGACTTACTGATGTGGCTACAAAATAGCACTTCAGAGTGAAG
Triticum aestivum genome assembly, chromosome: 2B.
LR862554.1:693085501-693085518
CTACGGATGTTGGTGATTCTTTTCATGACA693085501CAACGAAGACTTACTGATGTGGCTACAAAATAGCACTTCAGAGTGAAG
Triticum aestivum genome assembly, chromosome: 2B.
LR878439.1:686669975-686669992
CTACGGATGTTGGTGATTCTTTTCATGACA686669975CAACGAAGACTTACTGATGTGGCTACAAAATAGCACTTCAGAGTGAAG
Triticum aestivum genome assembly, chromosome: 2B.
LS992084.1:683819542-683819559
CTACGGATGTTGGTGATTCTTTTCATGACA683819542CAACGAAGACTTACTGATGTGGCTACAAAATAGCACTTCAGAGTGAAG
Triticum aestivum genome assembly, chromosome: 2B.
OU015725.1:688314139-688314156
CTACGGATGTTGGTGATTCTTTTCATGACA688314139CAACGAAGACTTACTGATGTGGCTACAAAATAGCACTTCAGAGTGAAG
Triticum aestivum genome assembly, chromosome: 2B.
OX637229.1:591123718-591123735
CTACGGATGTTGGTGATTCTTTTCATGACA591123718CAACGAAGACTTACTGATGTGGCTACAAAATAGCACTTCAGAGTGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCAGTAAGTCTTCGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAGTAAGTCTTCGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=ATCAGTAAGTCTTCGTTG&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=CAACGAAGACTTACTGAT&k=0&no_gap=0&offset=0&limit=42
0.158 | 0.008 | cgi_end;

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