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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 07:42:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdfw2042e17.y1 Mdfw Malus domestica cDNA clone Mdfw2042e17 5' similar to TR:Q9SZ67 Q9SZ67 PUTATIVE DISEASE RESISTANCE PROTEIN, mRNA sequence.
CN996653.1:525-544
ATTTTATGGAAGATTTTTGGTAAGTGGAAC525ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAACCACTGACAGATGT
Mdrtp1002P20.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA, mRNA sequence.
DT043037.1:293-312
AGCCAATGGAAGATTTTTGGTAAGTGGAAC293ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
TSA: Pyrus communis mRNA, contig: lc31104.
FX639235.1:219-238
GAAGATTTTATGGAAGANGGTAAGCGGAAC219ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141913.1:3450653-3450672
AGGCAATGGAAGATTTTAGGTAAGTGGAAC3450653ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAACCACTGACAGGTGT
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141913.1:3604236-3604255
AGCGAATGGAAGATTTTTGGTAAGTGGAAC3604236ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:3697069-3697088
ATTTTATGGAAGATTTTTGGTAAGTGGAAC3697069ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAACCACTGACAGATGT
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:3538322-3538341
ATTTTATGGAAGATTTTTGGTAAGTGGAAC3538322ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAACCACTGACAGATGT
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:3650213-3650232
AACCAATGGAAGATTTTTGGTAAGTGGAAC3650213ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:3608416-3608435
ATTTTATGGAAGATTTTTGGTAAGTGGAAC3608416ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAATCACTGACAGATGT
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:3204261-3204280
ATTTTATGGAAGATTTTTGGTAAGTGGAAC3204261ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAACCACTGACAGATGT
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:3680281-3680300
AGCCAATGGAAGATTTTTGGTAAGTGGAAC3680281ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Malus domestica genome assembly, chromosome: 4.
OU696680.1:3633565-3633584
ATTTTATGGAAGATTTTTGGTAAGTGGAAC3633565ATCGGTTGAACAGCGGTTAAAAAGTCGTTTTTAAAACCACTGACAGATGT
Malus domestica genome assembly, chromosome: 4.
OU744545.1:3702646-3702665
AGCCAATGGAAGATTTTTGGTAAGTGGAAC3702646ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Malus domestica genome assembly, chromosome: 4.
OU744956.1:3776084-3776103
AGCGAATGGAAGATTTTTGGTAAGTGGAAC3776084ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Malus domestica genome assembly, chromosome: 4.
OU744994.1:3761350-3761369
AGCGAATGGAAGATTTTTGGTAAGTGGAAC3761350ATCGGTTGAACAGCGGTTAAAAAGCCGTTTTTAAAACCACTGACAGATGT
Mdrta1017D18_e35356.g1 Apple_EST_Mdrta Malus domestica cDNA 5', mRNA sequence.
GO548238.1:363-382
ACATCTGTCAGTGGTTTTAAAAACGACTTT363TTAACCGCTGTTCAACCGATGTTCCACTTACCAAAAATCTTCCATAAAAT
Mdrta1017D20_e35357.g1 Apple_EST_Mdrta Malus domestica cDNA 5', mRNA sequence.
GO548262.1:364-383
CAGTCTGTCAATGGTTTTAAAAACGACTTT364TTAACCGCTGTTCAACCGATGTTCCACTTACCAAAAATCTTCCATAAAAT
Mdfw2042E17_e17370.g1 Mdfw Malus domestica cDNA 5', mRNA sequence.
GO551459.1:361-380
ACATCTGTCAGTGGTTTTAAAAACGACTTT361TTAACCGCTGTTCAACCGATGTTCCACTTACCAAAAATCTTCCATAAAAT
Malus x robusta genome assembly, chromosome: 17.
OY720341.1:22186937-22186956
ACATCTGTCAGTGATTTTAAAAACGACTTT22186937TTAACCGCTGTTCAACCGATGTTCCACTTACCAAAAATCTTCCATAAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCGGTTGAACAGCGGTTAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCGGTTGAACAGCGGTTAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.389 | 0.380 | search_plus_done; http://172.18.8.135:50400/match?q=ATCGGTTGAACAGCGGTTAA&k=0&no_gap=0&offset=0&limit=50
0.685 | 0.297 | search_minus_done; http://172.18.8.135:50400/match?q=TTAACCGCTGTTCAACCGAT&k=0&no_gap=0&offset=0&limit=35
0.688 | 0.003 | cgi_end;

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