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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-13 06:38:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Amphimallon solstitiale genome assembly, chromosome: 6.
OY720680.1:100783890-100783909
ATAAGATTTTCCCATTGTTCTAGTAGAACA100783890ATCGGTTTCCATCATTCCAGAAAATAGAGCTATAATATTAATATTAATTA
Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:41781124-41781143
AGAACAGACAATTTAGAAGACAAACAATAG41781124CTGGAATGATGGAAACCGATGATATCATCGACGTGTAATGAAACTTAATA
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:41744818-41744837
AGAACAGACAATTTAGAAGACAAACAATAG41744818CTGGAATGATGGAAACCGATGATATCATCGACGTGTAATGAAACTTAATA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:39254229-39254248
AGAACAGACAATTTAGAAGACAAACAATAG39254229CTGGAATGATGGAAACCGATGATATCATCGACGTGTAATGAAACTTAATA
Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:43541982-43542001
AGAACAGACAATTTAGAAGACAAACAATAG43541982CTGGAATGATGGAAACCGATGATATCATCGAGGTGTAATGAAACTTAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCGGTTTCCATCATTCCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCGGTTTCCATCATTCCAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=ATCGGTTTCCATCATTCCAG&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGAATGATGGAAACCGAT&k=0&no_gap=0&offset=0&limit=49
0.149 | 0.003 | cgi_end;

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