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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 08:14:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Sequence 2483 from Patent WO2007110314.
FB334957.1:292-311
GTGTTGAAGCAGGTGCATCCAGACATCGGG292ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
Sequence 2483 from Patent EP2221382.
HH766296.1:292-311
GTGTTGAAGCAGGTGCATCCAGACATCGGG292ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
Helianthus annuus EST clone HaDplR201H10.
AJ412596.1:285-304
GTGCTGAAACAGGTGCATCCGGATATCGGA285ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
Helianthus annuus EST, clone HaCotR010H03.
AJ829042.1:200-219
GTGTTGAAGCAGGTGCATCCAGACATCGGG200ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
EST473829 tomato shoot/meristem Solanum lycopersicum cDNA clone cTOF19E10 5' sequence, mRNA sequence.
BG128183.1:163-182
GTGCTGAAGCAAGTTCATCCCGATATCGGG163ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
EST511418 tomato shoot/meristem Solanum lycopersicum cDNA clone cTOF26P12 5' sequence, mRNA sequence.
BG643224.1:163-182
GTGCTGAAGCAAGTTCATCCCGATATCGGG163ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
QHA12F17.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHA12F17, mRNA sequence.
BQ909823.1:127-146
GTGCTGAAACAGGTGCATCCGGATATCCGA127ATCTCGAGCAAAGCTATGGGGATCATGAACCGTTTTATCAATGATATTTA
QHA20H22.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHA20H22, mRNA sequence.
BQ912351.1:127-146
GTGCTGAAACAGGTGCATCCGGATATCGGA127ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHA6N22.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHA6N22, mRNA sequence.
BQ913276.1:127-146
GTGCTGAAACAGGTGCATCCGGATATCGGA127ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHA7G23.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHA7G23, mRNA sequence.
BQ913423.1:127-146
GTGCTGAAACAGGTGCATCCGGATATCGGA127ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHB34H14.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB34H14, mRNA sequence.
BQ968596.1:142-161
GTGCTGAAACAGGTGCATCCGGATATCGGA142ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHB35L08.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB35L08, mRNA sequence.
BQ968952.1:129-148
GTGCTGAAACAGGTGCATCCGGATATCGGA129ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHB39A18.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB39A18, mRNA sequence.
BQ969613.1:127-146
GTGCTGAAACAGGTGCATCCGGATATCGGA127ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHB42D02.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB42D02, mRNA sequence.
BQ970475.1:127-146
GTGCTGAAACAGGTGCATCCGGATATCGGA127ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
DH0ALL26ZG11ZZM1 HaDevR5 Helianthus annuus cDNA clone HaDevR526G11, mRNA sequence.
CD852304.1:108-127
GTGTTGAAGCAGGTGCATCCAGACATCGGG108ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
QHK2H12.yg.ab1 QH_K sunflower H.paradoxus Helianthus paradoxus cDNA clone QHK2H12, mRNA sequence.
CF078443.1:240-259
GTGTTGAAGCAGGTGCACCCAGACATCGGG240ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
QHL21M16.yg.ab1 QH_L sunflower H.paradoxus (salt stress) Helianthus paradoxus cDNA clone QHL21M16, mRNA sequence.
CF084144.1:49-68
GTGTTGAAGCAGGTGCACCCAGACATCGGG49ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
QHM17J19.yg.ab1 QH_M sunflower H.argophyllus Helianthus argophyllus cDNA clone QHM17J19, mRNA sequence.
CF088014.1:162-181
GTGCTGAAACAGGTGCATCCGGATATCGGA162ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
QHM4F05.yg.ab1 QH_M sunflower H.argophyllus Helianthus argophyllus cDNA clone QHM4F05, mRNA sequence.
CF090338.1:171-190
GTGCTTATACAGGAGCATCCCGATATCAGA171ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTTATGAATGGGATATT
B03_45-77_03.ab1 leaf inoculated with Marssonia pathogen of Populus euramericana Populus x canadensis cDNA, mRNA sequence.
CX182993.1:306-325
GTCTTGAAACAAGTCCACCCTGATATCGGG306ATCTCGAGCAAAGCTATGGGTATCATGAACAGTTTCATCAATGATATCTT
DH0AQA16ZF06RM1 HaDevS1 Helianthus annuus cDNA clone HaDevS116F06, mRNA sequence.
CX946888.1:295-314
GTGTTGAAGCAGGTGCATCCAGACATCGGG295ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
CHAY5170.b1_D21.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAY5170, mRNA sequence.
DY921888.1:311-330
GTGTTGAAGCAGGTGCATCCAGACATCGGG311ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
CHPY10609.b1_A14.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPY10609, mRNA sequence.
DY942754.1:191-210
GTGTTGAAGCAGGTGCATCCAGACATCGGG191ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
CHEM557.b2_J19.ab1 CHE(LMS) serpentine sunflower Helianthus exilis cDNA clone CHEM557, mRNA sequence.
EE652002.1:280-299
GTGTTGAAGCAGGTGCATCCAGACATCGGT280ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAACGATATTTT
CHES4187.b1_F16.ab1 CHE(LMS) serpentine sunflower Helianthus exilis cDNA clone CHES4187, mRNA sequence.
EE654237.1:302-321
GTGCTGAAACAGGTGCATCCAGATATCGGA302ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATTAATGATATTTT
CHES4848.b1_O12.ab1 CHE(LMS) serpentine sunflower Helianthus exilis cDNA clone CHES4848, mRNA sequence.
EE655037.1:261-280
GTGTTGAAGCAGGTGCATCCAGACATCGGG261ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
CHTS3724.b1_G20.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS3724, mRNA sequence.
EL464775.1:299-318
GTGTTGAAGCAGGTGCATCCAGACATCGGG299ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
CHUZ715.b1_F12.ab1 CHU(XYZ) puzzle sunflower Helianthus paradoxus cDNA clone CHUZ715, mRNA sequence.
EL514325.1:299-318
GTGTTGAAGCAGGTGCACCCAGACATCGGG299ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTTATCAACGATATTTT
CBAF2814.g1:P T. versicolor host exudate reverse SSH library Triphysaria versicolor cDNA, mRNA sequence.
EX991280.1:207-226
GTCCTGAAACAGGTGCATCCGGATATCGGG207ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTTATCAATGATATTTT
CBAI2436.g1:P T. versicolor root tip enriched SSH library Triphysaria versicolor cDNA, mRNA sequence.
EY007712.1:224-243
GTCCTGAAACAGGTGCATCCGGATATCGGG224ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTCATTAATGATATTTT
CBAA2525.g1:P T. versicolor self root extracts forward SSH library Triphysaria versicolor cDNA, mRNA sequence.
EY013556.1:121-140
GTCCTGAAACAGGTGCATCCGGATATCGGG121ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTTATCAATGATATTTT
MF1_33_H07.b1_F001 Limnanthes alba EST Library MF1 Limnanthes alba cDNA clone MF1AT_AU_AV_AW1G_P14 5', mRNA sequence.
FD646146.1:279-298
GTCTTGAAGCAGGTTCATCCCGATATCGGT279ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTCATCAACGATATCTT
MF1_90_C12.b1_F001 Limnanthes alba EST Library MF1 Limnanthes alba cDNA clone MF1CH_CI_CJ_CK1G_E23 5', mRNA sequence.
FD650982.1:281-300
GTCTTGAAGCAGGTTCATCCCGATATCGGT281ATCTCGAGCAAAGCTATGGGGATCATGAACAGTTTCATCAACGATATCTT
Solanum melongena mRNA, clone: AE006O18, 5'end, expressed in ovary at anthesis.
FS003411.1:253-272
GTGCTGAAGCAGGTTCATCCCGACATTGGG253ATCTCGAGCAAAGCTATGGGTATCATGAATAGCTTTATCAATGATATCTT
Solanum melongena mRNA, clone: LS002M11, 5'end, expressed in ovary at anthesis.
FS018787.1:127-146
GTGCTGAAGCAGGTTCATCCCGACATTGGG127ATCTCGAGCAAAGCTATGGGTATCATGAATAGCTTTATCAATGATATCTT
Solanum melongena mRNA, clone: LS004C24, 5'end, expressed in ovary at anthesis.
FS019673.1:253-272
GTGCTGAAGCAGGTTCATCCCGACATTGGG253ATCTCGAGCAAAGCTATGGGTATCGTGAATAGCTTTATCAATGATATCTT
TSA: Sesamum indicum cultivar Zhongzhi 11 Unigene26711 mRNA sequence.
JL356001.1:266-285
GTTCTGAAGCAGGTGCATCCAGATATTGGC266ATCTCGAGCAAAGCTATGGGGATTATGAATAGTTTCATTAACGATATCTT
Solanum tuberosum chromosome 11 clone RH170D10, complete sequence.
AC243048.1:83848-83867
GTGCTGAAGCAAGTTCATCCTGATATCGGG83848ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
Solanum tuberosum cultivar P8 chromosome 11.
CP046684.1:4224198-4224217
GTGYTGAARCAAGTTCATCCYGATATCGGG4224198ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
Solanum tuberosum cultivar MSH/14-112 chromosome 11.
CP046691.1:4224207-4224226
GTGCTGAAGCAAGTTCATCCYGATATYGGG4224207ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
Solanum pinnatisectum cultivar CGN17745 chromosome 11.
CP047563.1:4209352-4209371
GTGCTGAAGCAAGTTCATCCTGATATCGGG4209352ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
Solanum tuberosum cultivar Solyntus chromosome 11.
CP055244.1:5546583-5546602
GTGCTGAAGCAAGTTCATCCTGATATCGGG5546583ATCTCGAGCAAAGCTATGGGGATCATGAACAGCTTCATCAATGATATCTT
Astragalus glycyphyllos genome assembly, chromosome: 6.
OY754312.1:30382430-30382449
GTTTTGAAGCAGGTTCATCCTGATATCGGG30382430ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTCATCAATGATATTTT
Draba incana genome assembly, chromosome: 1.
OY755202.1:44684296-44684315
GTTCTGAAACAAGTCCACCCAGATATTGGG44684296ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTCATCAACGATATCTT
Draba incana genome assembly, chromosome: 3.
OY755204.1:31841377-31841396
GTTCTGAAACAAGTCCATCCAGATATTGGG31841377ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTCATCAACGATATCTT
Draba incana genome assembly, chromosome: 4.
OY755205.1:36529416-36529435
GTTCTGAAGCAAGTGCATCCAGATATCGGA36529416ATCTCGAGCAAAGCTATGGGAATCATGAACAGTTTCATCAACGATATCTT
Draba incana genome assembly, chromosome: 5.
OY755206.1:4818443-4818462
GTTTTGAAACAGGTTCATCCAGATGTCGGA4818443ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTTATTAACGATATATT
Draba incana genome assembly, chromosome: 7.
OY755208.1:32467990-32468009
GTTTTGAAACAGGTTCATCCAGATGTCGGA32467990ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTTATTAACGATATATT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:12442040-12442059
GTTCTGAAGCAGGTTCATCCTGATATCGGA12442040ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:12484429-12484448
GTTCTGAAGCAGGTTCATCCTGATATCGGA12484429ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:12526827-12526846
GTTCTGAAGCAGGTTCATCCTGATATCGGA12526827ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:12566069-12566088
GTTCTGAAGCAGGTTCATCCTGATATCGGA12566069ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:14480412-14480431
GTTCTGAAGCAGGTTCATCCTGATATAGGA14480412ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:14519941-14519960
GTTCTGAAGCAGGTTCATCCTGATATCGGA14519941ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:14706845-14706864
GTTCTGAAGCAGGTTCATCCTGATATCGGA14706845ATCTCGAGCAAAGCTATGGGAATTATGAACAGCTTCATCAATGATATCTT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:107633893-107633912
GTTCTGAAGCAGGTTCATCCTGATATCGGA107633893ATCTCGAGCAAAGCTATGGGGATTATGAACAGCTTCATCAATGATATTTT
Verbascum thapsus genome assembly, chromosome: 11.
OY770114.1:12715268-12715287
GTTTTGAAGCAGGTGCATCCAGATATCGGA12715268ATCTCGAGCAAAGCTATGGGGATTATGAACAGTTTCATCAACGATCTGTT
Nasturtium officinale genome assembly, chromosome: 8.
OY978506.1:8099550-8099569
GTGCTGAAACAAGTTCATCCAGATATTGGG8099550ATCTCGAGCAAAGCTATGGGAATCATGAACAGCTTCATCAATGACATCTT
Cardamine chenopodiifolia genome assembly, chromosome: 30.
OZ000488.1:11099533-11099552
GTGCTGAAACAAGTTCATCCAGATATTGGA11099533ATCTCGAGCAAAGCTATGGGAATCATGAACAGCTTCATCAATGATATCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCTCGAGCAAAGCTATGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTCGAGCAAAGCTATGGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.410 | 1.402 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTCGAGCAAAGCTATGGG&k=0&no_gap=0&offset=0&limit=50
1.466 | 0.056 | search_minus_done; http://172.18.8.135:50400/match?q=CCCATAGCTTTGCTCGAGAT&k=0&no_gap=0&offset=0&limit=0
1.466 | 0.000 | cgi_end;

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