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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 00:25:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS24032H08 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120905.1:559-578
TACACACCACAAACACCTCTTTTTCCTACT559ATCTGAAGCTGGGCTCCTTTGTAATTCAGGCTCTGAATTTGCATTTGACT
TSA: Capsicum annuum MGMT_Contig4683, mRNA sequence.
JW054927.1:571-590
TACACACCACAAACACCTCTTTTTCCTACT571ATCTGAAGCTGGGCTCCTTTGTAATTCAGGCTCTGAATTTGCATTTGACT
BJ03007H01 BJ03 Capsicum annuum cDNA 5', mRNA sequence.
CO910566.1:255-274
AGTCAAATGCAAATTCAGAGCCTGAATTAC255AAAGGAGCCCAGCTTCAGATAGTAGGAAAAAGAGGTGTTTGTGGTGTGTA
KS15003D01 KS15 Capsicum annuum cDNA, mRNA sequence.
GD063645.1:218-237
AGTCAAATGCAAATTCAGAGCCTGAATTAC218AAAGGAGCCCAGCTTCAGATAGTAGGAAAAAGAGGTGTTTGTGGTGTGTA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:198320570-198320589
AGTCAAATGCAAATTCAGAGCCTGAATTAC198320570AAAGGAGCCCAGCTTCAGATAGTAGGAAAAAGAGGTGTTTGTGGTGTGTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:197505455-197505474
AGTCAAATGCAAATTCAGAGCCTGAATTAC197505455AAAGGAGCCCAGCTTCAGATAGTAGGAAAAAGAGGTGTTTGTGGTGTGTA
Tetragnatha montana genome assembly, chromosome: 7.
OY796681.1:25975933-25975952
GCATTCAATGAATGGAAGGGAAATTATTTG25975933AAAGGAGCCCAGCTTCAGATTCTCATTCTAGAAACAAGTGTGTTGCTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCTGAAGCTGGGCTCCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTGAAGCTGGGCTCCTTT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.210 | 0.201 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTGAAGCTGGGCTCCTTT&k=0&no_gap=0&offset=0&limit=50
0.370 | 0.160 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGGAGCCCAGCTTCAGAT&k=0&no_gap=0&offset=0&limit=48
0.374 | 0.004 | cgi_end;

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