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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 07:37:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys dimidiatus genome assembly, chromosome: 4.
OU015377.1:77811208-77811227
GGGTGATGGACTCAGAAGCAGTAGCTGCAG77811208ATGCAGTGGCCATGGCAGACTGCTTTGAGATAGTGCTATTTGAACAGAGA
Chitinophaga sp. HK235 chromosome, complete genome.
CP073766.1:445361-445380
AATACTACACCGGAACACCTCGCTATACCG445361ATGCAGTGGCCATGGCAGACAGCATCCTCACCAACGCACCTTATACGCTG
Lumbricus rubellus genome assembly, chromosome: 5.
OX243815.1:17205316-17205335
AGAAAGACAGACAGAGACAGACAGTGGCAG17205316ATGCAGTGGCCATGGCAGACCGGACAAGCAAGCAGCCGAGGCTGATACAC
Telmatherina bonti genome assembly, chromosome: 7.
OW121827.1:16213861-16213880
TCAGAGGATATTCAAAACCTCTCTTCTAAA16213861GTCTGCCATGGCCACTGCATCCTTTAAAAGAAGTGTGTGGCGAGGAAATA
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:23541048-23541067
GACAGTGAGATACTGACGAGGCAATGCGTT23541048GTCTGCCATGGCCACTGCATATAAAATATATGCATCTCAGGATATATTTA
Harmothoe impar genome assembly, chromosome: 16.
OX381719.1:11732415-11732434
TTTGTGGGGTAAGGGCCCCTCAGGAGCACT11732415GTCTGCCATGGCCACTGCATAATAGATAAATAAAATTTGTTATTAAAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGCAGTGGCCATGGCAGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGCAGTGGCCATGGCAGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.119 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=ATGCAGTGGCCATGGCAGAC&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=GTCTGCCATGGCCACTGCAT&k=0&no_gap=0&offset=0&limit=47
0.155 | 0.002 | cgi_end;

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