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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 09:53:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys percivali genome assembly, chromosome: X.
OU015760.1:85239107-85239124
ATATGTATGATTGTTCATTTTCTTGGGTGT85239107ATGTGCATGGGTTGTGTATGCCTAGTGCTAAGGAGGCCCCAAGAAGGC
Sus scrofa scrofa breed NS chromosome 4.
CP071555.1:53330453-53330470
AGGGAAGTGTTGGCATGCGTGCTCACGCAC53330453ATGTGCATGGGTTGTGTATGTGCTTGTTTGTTTAAGAGGAAAAATGTA
Sus scrofa scrofa breed NS chromosome 12.
CP071563.1:27671423-27671440
TTGGTCCTTAGATTATAAATGTATTTATTT27671423ATGTGCATGGGTTGTGTAGTACATAAAGATTAAAAAAAAAAAAACTGA
Balaenoptera acutorostrata genome assembly, chromosome: 3.
OX465352.1:57315874-57315891
GGGCTCTGTAGTTGTGGTGTGTAGGCTCCA57315874ATGTGCATGGGTTGTGTAGTTGCAGCACACAGGCTCTCTAGTTGTGGT
Eptesicus nilssonii genome assembly, chromosome: 8.
OX621287.1:435459-435476
ATTTTATGTGGGGTGTGTGTGAGCGTGTGC435459ATGTGCATGGGTTGTGTATGTGACTGTATGTGTGTGACTGTTGTGTGT
Sus scrofa genome assembly, chromosome: 4.
OY997211.1:56392966-56392983
AGGGAAGTGTTGGCATGCGTGCTCACGCAC56392966ATGTGCATGGGTTGTGTATGTGCTTGTTTGTTTAAGAGGAAAAATGTA
Sus scrofa genome assembly, chromosome: 12.
OY997219.1:27235254-27235271
TTGGTCCTTAGATTATAAATGTATTTATTT27235254ATGTGCATGGGTTGTGTAGTACATAAAGATTAAAAAAAAAAAAACTGA
Mastacembelus armatus genome assembly, chromosome: 11.
LR535843.1:13624177-13624194
TGCTGGCTGGCATGTGGTTTTCCTCTAAGA13624177ATGTGCATGGGTTGTGTACAGACTGAAGATGATGAGTCCTTGATCTCG
Scyliorhinus canicula genome assembly, chromosome: 9.
LR744038.1:56610069-56610086
TATGGCTCTTTTCATGTGCATGCTGGCCAG56610069ATGTGCATGGGTTGTGTAGCAGAGTCATAAGCCAGTTTGTCCATGGAT
Limanda limanda genome assembly, chromosome: 14.
OY755005.1:2650646-2650663
GGTGTTTTAGTGTATGTGTGAATTGTTATG2650646ATGTGCATGGGTTGTGTATGACAACTGTTTACAAACCAACTGGCCCCT
Protomyctophum bolini genome assembly, chromosome: 14.
OZ001279.1:18589958-18589975
GGTTGCAGAATTATCTTATATCATTATGGT18589958ATGTGCATGGGTTGTGTATGTTTATGCGCATACAATCAACCCCAAATG
WHE2166_B06_D12ZS Triticum turgidum L. var. durum (durum wheat) whole plant cDNA library Triticum turgidum cDNA clone WHE2166_B06_D12, mRNA sequence.
BF292895.1:272-289
TGTGAGATGGACGCACAGTGACCGGGTGAT272ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
OPMF01137 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 131-H09-T3.seq, mRNA sequence.
EL684897.1:419-436
GGCGAGCAGGATGTGGACTAAGTTCTCTTC419ATGTGCATGGGTTGTGTACATCAATAGTAGTACGATAATATGGTCAAG
Sus scrofa GSS, clone WTSI_1005-851C12, end sequence WTSI_1005-851C12.R.
HE534106.1:23-40
TAGATTATAAATGTATTTATTT23ATGTGCATGGGTTGTGTAGTACATAAAGATTAAAAAAAAAAAAACTGA
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-239L1.
CU179669.3:210329-210346
AGGGAAGTGTTGGCATGCGTGCTCACGCAC210329ATGTGCATGGGTTGTGTATGTGCTTGTTTGTTTAAGAGGAAAAATGTA
Elaeis guineensis microsatellite DNA, clone mEgCIR1730.
AJ578571.1:411-428
TGTGTGTGTTGTGTGCGCCCATGCGCGCAC411ATGTGCATGGGTTGTGTATGCATGCACATGCATGTGTGACACATTCAT
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:52811175-52811192
CCCATACAAAATATTTATTTGGGTCCGCCC52811175ATGTGCATGGGTTGTGTATGTCTATGTGTCTTAGAGAGAAGGTGAGAA
Triticum aestivum genome assembly, chromosome: 1B.
LR862509.1:637797689-637797706
TGTGAGATGGACGCACAGTGACCGGGTGAT637797689ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR862530.1:628423735-628423752
TGTGAGATGGACGCACAGTGACCGGGTGAT628423735ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR862551.1:631970287-631970304
TGTGAGATGGACGCACAGTGACCGGGTGAT631970287ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR865459.1:627333347-627333364
TGTGAGATGGACGCACAGTGACCGGGTGAT627333347ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR865480.1:625097570-625097587
TGTGAGATGGACGCACAGTGACCGGGTGAT625097570ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR865501.1:640095782-640095799
TGTGAGATGGACGCACAGTGACCGGGTGAT640095782ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 6B.
LR865516.1:233546961-233546978
TTTATCGTCGAGTTGATATGAATAACATGA233546961ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Triticum aestivum genome assembly, chromosome: 1B.
LR865740.1:644293190-644293207
TGTGAGATGGACGCACAGTGACCGGGTGAT644293190ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR865761.1:625653907-625653924
TGTGAGATGGACGCACAGTGACCGGGTGAT625653907ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 6B.
LR865776.1:228599111-228599128
TTTATCGTCGAGTTGATATGAATAACATGA228599111ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Triticum aestivum genome assembly, chromosome: 1B.
LR877310.1:636166449-636166466
TGTGAGATGGACGCACAGTGACCGGGTGAT636166449ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LR878436.1:628723724-628723741
TGTGAGATGGACGCACAGTGACCGGGTGAT628723724ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
LS992081.1:626155538-626155555
TGTGAGATGGACGCACAGTGACCGGGTGAT626155538ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum turgidum subsp. durum genome assembly, chromosome: 1B.
LT934112.1:620907307-620907324
TGTGAGATGGACGCACAGTGACCGGGTGAT620907307ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
OU015722.1:648667825-648667842
TGTGAGATGGACGCACAGTGACCGGGTGAT648667825ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 6B.
OU015737.1:230758000-230758017
TTTATCGTCGAGTTGATATGAATAACATGA230758000ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Triticum aestivum genome assembly, chromosome: 1B.
OU343176.1:643053240-643053257
TGTGAGATGGACGCACAGTGACCGGGTGAT643053240ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
OU963873.1:643325161-643325178
TGTGAGATGGACGCACAGTGACCGGGTGAT643325161ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 6B.
OU963888.1:245436388-245436405
TTTATCGTCGAGTTGATATGAATAACATGA245436388ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Triticum aestivum genome assembly, chromosome: 1B.
OV100738.1:637112430-637112447
TGTGAGATGGACGCACAGTGACCGGGTGAT637112430ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
OV100738.1:663313132-663313149
TTTATCGTCGAGTTGATATGAATAACATGA663313132ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Triticum aestivum genome assembly, chromosome: 1B.
OW530311.1:637112430-637112447
TGTGAGATGGACGCACAGTGACCGGGTGAT637112430ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 1B.
OW530311.1:663313132-663313149
TTTATCGTCGAGTTGATATGAATAACATGA663313132ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Solanum dulcamara genome assembly, chromosome: 2.
OX359253.1:35583113-35583130
TATCGTTAATACTCTTAGAGGTCTGTAGAC35583113ATGTGCATGGGTTGTGTATATATGTGTGTTCGATTATGTTTATATGAC
Chionographis japonica genome assembly, chromosome: 7.
OX393555.1:48897343-48897360
AATGGGGTATGATGCCATATAGGCAAGCTC48897343ATGTGCATGGGTTGTGTATGAAAATATTAAAACATATATGAAGTGTTT
Sambucus nigra genome assembly, chromosome: 1.
OX422207.1:693259308-693259325
CCGGGGTTAATTAGGCGGGGTGTTACACAA693259308ATGTGCATGGGTTGTGTAAGGTCATGTGGGAAGTGGGGGTGGTGAGGA
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:275095670-275095687
GGGTGAGGGTTAATTAGGAATTATGCACAC275095670ATGTGCATGGGTTGTGTAAGGTCATGTGAATGGGAATAAAAATCTGAT
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:467256791-467256808
AGGTTAGGGTATTTAGGAAATTATGCACAC467256791ATGTGCATGGGTTGTGTAAGGTCATGTGGGAAGTGGGGTAGTTGGGGG
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:713891508-713891525
AAGTTGGGGTCAAAATAGGAAAATGAACAA713891508ATGTGCATGGGTTGTGTATGGTAATGGTGAGAGGTGGGGTGGTGAGGA
Sambucus nigra genome assembly, chromosome: 4.
OX422210.1:661639829-661639846
AAATTGGGGTTAAAATAGGGAAATGCACAA661639829ATGTGCATGGGTTGTGTAAGGTCATGTGGGCAGTGGGATAATGAGGTA
Sambucus nigra genome assembly, chromosome: 6.
OX422212.1:136786845-136786862
AAGTTGGGGTTAAAATAGGAAAATGCACAA136786845ATGTGCATGGGTTGTGTAAGGTCATGTGGGAAGTGAAGTGGTGAGGAT
Sambucus nigra genome assembly, chromosome: 7.
OX422213.1:290236739-290236756
AAGTTGGGATCAAAATAGGAAAATGCACAA290236739ATGTGCATGGGTTGTGTAAGGTCATGTGGGAAGCGGGGTGGTGAGGAT
Sambucus nigra genome assembly, chromosome: 16.
OX422222.1:160741083-160741100
ATGAGGGAATAAAAATAGGGAAATACAAAA160741083ATGTGCATGGGTTGTGTAAGGTTATGTGGAATAAATCGTGGTTGAGTG
Salicornia ramosissima genome assembly, chromosome: 3.
OX596234.1:42353446-42353463
ATTCATTCATTCACACTATCACAATATGAA42353446ATGTGCATGGGTTGTGTATTCTAAAGCCTAACTTCTCCTCCTACCTTT
Triticum aestivum genome assembly, chromosome: 1B.
OX637226.1:542533938-542533955
TGTGAGATGGACGCACAGTGACCGGGTGAT542533938ATGTGCATGGGTTGTGTATCCTAAATTCGTCGCGTGTACGTAGGCTGG
Triticum aestivum genome assembly, chromosome: 6B.
OX637241.1:186174515-186174532
TTTATCGTCGAGTTGATATGAATAACATGA186174515ATGTGCATGGGTTGTGTAACAATGCTTTACTACTGCAAGATAGTGAGA
Alnus glutinosa genome assembly, chromosome: 13.
OY340910.1:7126182-7126199
ATACATTGGTGGACCTATGCACGTGAACCT7126182ATGTGCATGGGTTGTGTAAATGTTGTACATAGTAATATTGTGCAAAAA
Hordeum bulbosum genome assembly, chromosome: 7H_3.
OY737538.1:118711597-118711614
TGGAGTGTGTGCACATGAGTGAGTATGTGT118711597ATGTGCATGGGTTGTGTATGTGTTGGTGTGTGTGTGCATGAGGTTACT
Hordeum bulbosum genome assembly, chromosome: 7H_3.
OY737631.1:376532055-376532072
TGGAGTGTGTGCACATGAGTGAGTATGTGT376532055ATGTGCATGGGTTGTGTATGTGTTGGTGTGTGTGTGCATGAGGTTACT
Triticum monococcum genome assembly, chromosome: 2A.
OY737851.1:760061814-760061831
ACTATGATATTATTCCCCTTTATATTATAT760061814ATGTGCATGGGTTGTGTAATGATTCCCGACTTGCGACATTGCTTTCCA
Triticum monococcum genome assembly, chromosome: 7A.
OY737856.1:275337789-275337806
CTATGCTATTATTCCCCTTTTATATTATAT275337789ATGTGCATGGGTTGTGTAATGATTCCCGACTTGCGACATTGCTTTCCA
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:191235389-191235406
ACTATGATATTATTCCCCTTTATATTATAT191235389ATGTGCATGGGTTGTGTAATGATTCCCGACTTGCGACATTGCTTTCAA
Triticum monococcum genome assembly, chromosome: 7A.
OY737864.1:271480909-271480926
CTATGCTATTATTCCCCTTTTATATTATAT271480909ATGTGCATGGGTTGTGTAATGATTCCCGACTTGCGACATTGCTTTCCA
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:1796874025-1796874042
CATCTACTTGAGGCATTCTTGATAAGGGGT1796874025ATGTGCATGGGTTGTGTATAGGCACATCAAGCTTACCAGCCTCGACTG
Spodoptera littoralis genome assembly, chromosome: 24.
LR824555.2:9642767-9642784
GCTGAAGCTGTCCAACAGTTGGAACAGCTT9642767ATGTGCATGGGTTGTGTATTTGTGGTGACCTGTGTTTGCCCAAATATA
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:43598630-43598647
GGTGTTGAATACGTATTATTACTACTGTGC43598630ATGTGCATGGGTTGTGTAGTTTCGGTTTCTGCACATGCATAATGACGT
Lithophane semibrunnea genome assembly, chromosome: 15.
OX376201.1:13058164-13058181
TAATTTTAAGTGTGGAAGAAAGTTAGTTGG13058164ATGTGCATGGGTTGTGTAATGTTCGGTTACTCTGAAGTCTAATCGTTT
Tipula unca genome assembly, chromosome: 1.
OX596380.1:25504246-25504263
AGAATAATTTTTAGTGAATTAGATTTCGAT25504246ATGTGCATGGGTTGTGTACAATACATAGACGACGAGGAGCACGAGTAA
Agrotis clavis genome assembly, chromosome: 10.
OX940927.1:5468281-5468298
AGAGGACGTAAGGGGAAAAGATAGAATAAA5468281ATGTGCATGGGTTGTGTAAAAGATGAAGCAATAAATATCTGTTTGACG
Urophora cardui genome assembly, chromosome: 4.
OY482673.1:123773321-123773338
CCTAGACTTGTACTAGGCCTACTTTTAAGT123773321ATGTGCATGGGTTGTGTAAATAAAACCTGGCTTTTGCATCAAATAAAA
Thysanoteuthis rhombus genome assembly, chromosome: 27.
OY735224.1:46727374-46727391
AGGTGGAAGTGTTGGTGTGTGAATATGTGT46727374ATGTGCATGGGTTGTGTACGTGTGTTATGCATATGTCTATGTGTGTGT
Sepiola atlantica genome assembly, chromosome: 13.
OY744527.1:51295167-51295184
ATGGTATGTGTATGGGTGTGTATAGATGGT51295167ATGTGCATGGGTTGTGTATAGATGGTATGTGCATGGGTTGTGTATAGA
Sepiola atlantica genome assembly, chromosome: 13.
OY744527.1:51295193-51295210
TGGTATGTGCATGGGTTGTGTATAGATGGT51295193ATGTGCATGGGTTGTGTATAGATGGTATGTGTATGGGTTGTGTATAGA
Eunapius fragilis genome assembly, chromosome: 2.
OY811972.1:470027-470044
TAGGAGGACTTTATACCAAGCGAGCCAATT470027ATGTGCATGGGTTGTGTAACTTGTTATTCCTTCATTGCCAAGAGGGGG
Eunapius fragilis genome assembly, chromosome: 2.
OY811972.1:11326592-11326609
TAGGAGGACTTTATACCAAGCGAGCCAATT11326592ATGTGCATGGGTTGTGTAACTTGTTATTCCTTCATTGCCAAGAGGGGG
Eunapius fragilis genome assembly, chromosome: 4.
OY811974.1:8923904-8923921
TAGGAGGACTTTATACCAAGCGAGCCAATT8923904ATGTGCATGGGTTGTGTAACTTGTTATCCCTTCATTGCCAAGAGGGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGTGCATGGGTTGTGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTGCATGGGTTGTGTA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.231 | 0.223 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTGCATGGGTTGTGTA&k=0&no_gap=0&offset=0&limit=50
0.298 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=TACACAACCCATGCACAT&k=0&no_gap=0&offset=0&limit=0
0.298 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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