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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 20:41:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 5 from patent US 8686125.
HJ917195.1:486-505
AATCCAACGAAGACAAGGTTTCGGACCACT486CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Sequence 8 from patent US 8686125.
HJ917197.1:487-506
AATCCAACGAAGACAAGGTTTCGGACCACT487CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Sequence 13 from patent US 8686125.
HJ917202.1:645-664
CATCCAATCGAAGACAAGGTTTCGGACACT645CAACGGAACAAATAAGGGAAAAGGATATAAACCACTCAACGAAGTTCATC
Sequence 15 from patent US 8686125.
HJ917204.1:650-669
CATCCAATCGAAGACAAGGTTTCGGACACT650CAACGGAACAAATAAGGGAAAAGGATATAAACCACTCAACGAAGTTCATC
Sequence 43 from patent US 8686125.
HJ917229.1:495-514
AATCCAACGAAGACAAGGTTTCGGACCACT495CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Sequence 5 from Patent EP2285968.
JA312357.1:486-505
AATCCAACGAAGACAAGGTTTCGGACCACT486CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Sequence 8 from Patent EP2285968.
JA312360.1:487-506
AATCCAACGAAGACAAGGTTTCGGACCACT487CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Sequence 13 from Patent EP2285968.
JA312365.1:645-664
CATCCAATCGAAGACAAGGTTTCGGACACT645CAACGGAACAAATAAGGGAAAAGGATATAAACCACTCAACGAAGTTCATC
Sequence 15 from Patent EP2285968.
JA312367.1:650-669
CATCCAATCGAAGACAAGGTTTCGGACACT650CAACGGAACAAATAAGGGAAAAGGATATAAACCACTCAACGAAGTTCATC
Malus pumila MdMYB1 gene, 5'UTR, partial sequence, allele: MdMYB1-4.
AB557638.1:870-889
AATCCAACGAAGACAAGGTTTCGGACCACT870CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus pumila MdMYB1 gene, 5'UTR, partial sequence, allele: MdMYB1-5.
AB557639.1:874-893
AATCCAACGAAGACAAGGTTTCGGACCACT874CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus pumila MdMYB1 gene, 5'UTR, partial sequence, allele: MdMYB1-6.
AB557640.1:870-889
AATCCAACGAAGACAAGGTTTCGGACCACT870CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus pumila MdMYB10 gene, 5'UTR, partial sequence, allele: MdMYB10(P).
AB557641.1:874-893
AATCCAACGAAGACAAGGTTTCGGACCACT874CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus pumila MdMYB10 gene, 5'UTR, partial sequence, allele: MdMYB10(PP).
AB557642.1:874-893
AATCCAACGAAGACAAGGTTTCGGACCACT874CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141918.1:3519676-3519695
AATCCAACGAAGACAAGGTTTCGGACCACT3519676CAACGGAACAAATAAGGGAAAGGGATATAAACCACTCAACGAAATCCATC
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:3003339-3003358
AATCCAACGAAGACAAGGTTTCGGACCACT3003339CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:3188436-3188455
AATCCAACGAAGACAAGGTTTCGGACCACT3188436CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:3197605-3197624
AATCCAACGAAGACAAGGTTTCGGACCACT3197605CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus x domestica MYB transcription factor (MYB1) gene, MYB1-1 allele, promoter region and complete cds.
DQ886414.1:903-922
AATCCAACGAAGACAAGGTTTCGGACCACT903CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus x domestica MYB transcription factor (MYB1) gene, MYB1-2 allele, promoter region and complete cds.
DQ886415.1:902-921
AATCCAACGAAGACAAGGTTTCGGACCACT902CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus x domestica MYB transcription factor (MYB1) gene, MYB1-3 allele, promoter region and complete cds.
DQ886416.1:902-921
AATCCAACGAAGACAAGGTTTCGGACCACT902CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus x domestica cultivar Royal Gala MYB10 (MYB10) gene, promoter region and complete cds.
EU518249.2:1839-1858
AATCCAACGAAGACAAGGTTTCGGACCACT1839CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus x domestica cultivar niedzwetzkyana MYB10 gene, promoter region and 5'UTR.
EU518250.1:485-504
AATCCAACGAAGACAAGGTTTCGGACCACT485CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Malus x domestica cultivar Ralls MYB1 transcription factor gene, complete cds.
HQ259417.2:1838-1857
AATCCAACGAAGACAAGGTTTCGGACCACT1838CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Pyrus communis R2R3 MYB transcription factor 10 (MYB10) gene, promoter region and partial cds.
JX403962.1:655-674
ATCCAATCGAAGACAAGGTTTCGGACCACT655CAACGGAACAAATAAGGGAAAAGGATATAAACCACTCAACGAAGTTCATC
Malus domestica cultivar Granny Smith promoter region and 5'UTR-like (MYB10) gene, complete sequence; and MYB10 (MYB10) gene, promoter region and partial cds.
KX822763.1:22-41
AAGACAAGGTTTCGGACCACT22CAACGGAACAAATAAGGGAAAGGGATATAAACCATTCAACGAAATCCATC
Proteus mirabilis strain AR_0155, complete genome.
CP021694.1:1755355-1755374
CTAAGCCACCGAGTAACATACTGACAACGG1755355CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain AR_0156 chromosome, complete genome.
CP021852.1:3622566-3622585
CTAAGCCACCGAGTAACATACTGACAACGG3622566CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome.
CP026044.1:934469-934488
CTAAGCCACCGAGTAACATACTGACAACGG934469CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain K670 chromosome.
CP028356.1:3316360-3316379
CTAAGCCACCGAGTAACATACTGACAACGG3316360CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain K1609 chromosome.
CP028522.1:1359175-1359194
CTAAGCCACCGAGTAACATACTGACAACGG1359175CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain AR379 chromosome, complete genome.
CP029133.1:581913-581932
CTAAGCCACCGAGTAACATACTGACAACGG581913CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain AR_0029 chromosome, complete genome.
CP029725.1:282490-282509
CTAAGCCACCGAGTAACATACTGACAACGG282490CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmSC1111 chromosome, complete genome.
CP034090.1:541957-541976
CTAAGCCACCGAGTAACATACTGACAACGG541957CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain DY.F1.2 chromosome, complete genome.
CP046049.1:1784519-1784538
CTAAGCCACCGAGTAACATACTGACAACGG1784519CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain ChSC1905 chromosome, complete genome.
CP047929.1:46240-46259
CTAAGCCACCGAGTAACATACTGACAACGG46240CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmBR607 chromosome, complete genome.
CP049753.1:2306929-2306948
CTAAGCCACCGAGTAACATACTGACAACGG2306929CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain MPE0734 chromosome, complete genome.
CP053615.1:3716091-3716110
CTAAGCCACCGAGTAACATACTGACAACGG3716091CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain MPE0767 chromosome, complete genome.
CP053616.1:785910-785929
CTAAGCCACCGAGTAACATACTGACAACGG785910CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain XH1653 chromosome, complete genome.
CP065039.2:2884279-2884298
CTAAGCCACCGAGTAACATACTGACAACGG2884279CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmBJ024-1 chromosome, complete genome.
CP065144.1:985412-985431
CTAAGCCACCGAGTAACATACTGACAACGG985412CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmBJ023-2 chromosome, complete genome.
CP065145.1:2628056-2628075
CTAAGCCACCGAGTAACATACTGACAACGG2628056CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmBJ020-1 chromosome, complete genome.
CP065146.1:985412-985431
CTAAGCCACCGAGTAACATACTGACAACGG985412CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmBJ015-2 chromosome, complete genome.
CP065147.1:985412-985431
CTAAGCCACCGAGTAACATACTGACAACGG985412CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain PmBJ012-2 chromosome, complete genome.
CP065148.1:985412-985431
CTAAGCCACCGAGTAACATACTGACAACGG985412CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain N639-2X chromosome, complete genome.
CP073246.1:727406-727425
CTAAGCCACCGAGTAACATACTGACAACGG727406CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain S62-3-2-2 chromosome, complete genome.
CP073247.1:210085-210104
CTAAGCCACCGAGTAACATACTGACAACGG210085CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain N292 chromosome, complete genome.
CP073248.1:2913097-2913116
CTAAGCCACCGAGTAACATACTGACAACGG2913097CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain MN029 chromosome, complete genome.
CP102086.1:1202179-1202198
CTAAGCCACCGAGTAACATACTGACAACGG1202179CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain CZP17 chromosome, complete genome.
CP110371.1:1355445-1355464
CTAAGCCACCGAGTAACATACTGACAACGG1355445CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC
Proteus mirabilis strain CZP44 chromosome, complete genome.
CP110372.1:690567-690586
CTAAGCCACCGAGTAACATACTGACAACGG690567CAACGGAACAAATAAGGGAAAGGAAAAGAATGAAAAATGAGCTACTGATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACGGAACAAATAAGGGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACGGAACAAATAAGGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.372 | 0.363 | search_plus_done; http://172.18.8.135:50400/match?q=CAACGGAACAAATAAGGGAA&k=0&no_gap=0&offset=0&limit=50
0.421 | 0.049 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCCTTATTTGTTCCGTTG&k=0&no_gap=0&offset=0&limit=0
0.421 | 0.000 | cgi_end;

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