GGGenome | Results

Pyrus communis EST, clone L1068.
AJ504736.1:128-151

TTCATGTTTGGGGCGTCAAGAGAGCATGCT128CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus communis EST, clone L523.
AJ504751.1:185-208

TTCATGTTTGGGGCGTCAAGAGAGCATGCT185CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus communis EST, clone L649.
AJ504861.1:339-362

TTCATGTTTGGGGCGTCAAGAGAGCATGCT339CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus communis EST, clone L1068.
AJ504871.1:128-151

TTCATGTTTGGGGCGTCAAGAGAGCATGCT128CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus pyrifolia mRNA, clone: NFR2_33_60, 3' end sequence, expressed in fruit.
HX740020.1:464-487

TTCATGTTTGGGGCGTCAAGAGAGCATGCT464CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus pyrifolia mRNA, clone: NFR2_34_91, 5' end sequence, expressed in fruit.
HX751135.1:374-397

TTCATGTTTGGGGCGTCAAGAGAGCATGCT374CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus pyrifolia mRNA, clone: NFR6_01_63, 5' end sequence, expressed in fruit.
HX758950.1:170-193

TTCATGTTTGGGGCGTCAAGAGAGCATGCT170CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus pyrifolia mRNA, clone: NFR6_20_67, 5' end sequence, expressed in fruit.
HX760416.1:289-312

TTCATGTTTGGGGCGTCAAGAGAGCATGCT289CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAGGCT

Pyrus pyrifolia mRNA, clone: NFW1_07_17, 5' end sequence, expressed in flower bud.
HX761657.1:151-174

TTCATGTTTGGGGCGTCAAGAGAGCATGCT151CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Pyrus pyrifolia mRNA, clone: NFW1_10_07, 5' end sequence, expressed in flower bud.
HX761885.1:273-296

TTCATGTTTGGGGCGTCAAGAGAGCATGCT273CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc118.
FX608705.1:355-378

TTCATGTTTGGGGCGTCAAGAGAGCATGCT355CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc558.
FX609145.1:284-307

TTCATGTTTGGGGCGTCAAGAGAGCATGCT284CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc749.
FX609336.1:350-373

TTCATGTTTGGGGCGTCAAGAGAGCATGCT350CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc1199.
FX609786.1:226-249

TTCATGTTTGGGGCGTCAAGAGAGCATGCT226CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc1884.
FX610471.1:17-40

GTCAAGAGAGCATGCT17CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAACAAGCTCTGCT

TSA: Pyrus communis mRNA, contig: lc2076.
FX610663.1:310-333

TTCATGTTTGGGGCGTCAAGAGAGCATGCT310CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc2244.
FX610831.1:301-324

TTCATGTTTGGGGCGTCAAGAGAGCATGCT301CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc6603.
FX615188.1:322-345

TTCATGTTTGGGGCGTCAAGAGAGCATGCT322CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc6695.
FX615280.1:296-319

TTCATGTTTGGGGCGTCAAGAGAGCATGCT296CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc8072.
FX616657.1:357-380

TTCATGTTTGGGGCGTCAAGAGAGCATGCT357CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc18541.
FX627079.1:286-309

TTCATGTTTGGGGCGTCAAGAGAGCATGCT286CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc22415.
FX630884.1:275-298

TTCATGTTTGGGGCGTCAAGAGAGCATGCT275CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACATTCAAGAAGNAAGGCTTC

TSA: Pyrus communis mRNA, contig: lc23357.
FX631802.1:381-404

TTCATGTTTGGGGCGTCAAGAGAGCATGCT381CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc26522.
FX634855.1:265-288

TTCATGTTTGGGGCGTCAAGAGAGCATGCT265CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACANCAAGAAGNAAGGCTT

TSA: Pyrus communis mRNA, contig: lc27423.
FX635725.1:271-294

AGGTGNCATGNGGCGTCAAGAGAGCATGCT271CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAANTTTNCANCAN

TSA: Pyrus communis mRNA, contig: lc27524.
FX635821.1:240-263

TTCATGTTTGGGGCGTCAAGAGAGCATGCT240CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAANGGCTTCT

TSA: Pyrus communis mRNA, contig: lc28113.
FX636384.1:296-319

TTCATGTTTGGGGCGTCAAGAGAGCATGCT296CAAGTCCTGTTTCCTTTTCGTTACGGCCAATNAANAAGAAGNAAGGCTTCTTTC

TSA: Pyrus communis mRNA, contig: lc28614.
FX636865.1:228-251

TTCATGTTTGGGGCGTCAAGAGAGCATGCT228CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc29328.
FX637550.1:264-287

GTNATGTTTGGGGCGTCAAGAGTGCATGCT264CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANCANAGNGNAAAGGCTTCTTTC

TSA: Pyrus communis mRNA, contig: lc35649.
FX643389.1:253-276

TTCATGTTTGGGGCGTCAAGAGAGCATGCT253CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACNAAGAAGNGGCTTCTTTCA

TSA: Pyrus communis mRNA, contig: lc35789.
FX643516.1:243-266

ATCAGGTNCATGNCNTCAAGAGAGCATGCT243CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANCATTCAAGAAGNGGCTTCTTC

TSA: Pyrus communis mRNA, contig: lc35795.
FX643522.1:293-316

TTCATGTTTGGGGCNTCAAGAGAGCATGCT293CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACANAAGAAGNGGCTTCTT

TSA: Pyrus communis mRNA, contig: lc36318.
FX643996.1:248-271

ATCAGGTGNCATNCNTCAAGAGAGCATGCT248CAAGTCCTGTTTCCTTTTCGTTACGGNAATATTTACANCAAGNGGCTTCNCACA

TSA: Pyrus communis mRNA, contig: lc36736.
FX644377.1:277-300

TTCATGTTTGGGGCGTCAAGAGAGCATGCT277CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACNANAAAAGAAGNGGGGC

TSA: Pyrus communis mRNA, contig: lc36815.
FX644450.1:246-269

TCAGGTNCATNGGCGTCAAGAGAGCATGCT246CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACANGGCTTCNCACNAA

TSA: Pyrus communis mRNA, contig: lc36833.
FX644468.1:284-307

GNCATGTTTGGGGCGTCAAGAGAGCATGCT284CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANANAAGAAGNAGGCTTCTTTCA

TSA: Pyrus communis mRNA, contig: lc36954.
FX644582.1:260-283

TTCATGTTTGGGGCNTCAAGAGAGCATGCT260CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANCATTCAANGNTGCTTCNCACA

TSA: Pyrus communis mRNA, contig: lc37153.
FX644763.1:243-266

TTCATGTTTGGGGCGTCAAGAGAGCATGCT243CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTACAATTCAANAAAGGCTNCA

TSA: Pyrus communis mRNA, contig: lc37301.
FX644899.1:264-287

TTTCATGTTTNGGCGTCAAGAGAGCATGCT264CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACANCAAGAAGAAAAGGCTTC

TSA: Pyrus communis mRNA, contig: lc37550.
FX645134.1:285-308

TTCATGTTTGGGGCGTCAAGAGAGCATGCT285CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGANGNGGCTTC

TSA: Pyrus communis mRNA, contig: lc37959.
FX645502.1:229-252

TTCATGTTTGGGGCGTCAAGAGAGCATGCT229CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAANAANCTTC

TSA: Pyrus communis mRNA, contig: lc38056.
FX645593.1:252-275

GNCATGTTTGGGGCGTCAAGAGAGCATGCT252CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACANAANGNGGCTNCAGNAAG

TSA: Pyrus communis mRNA, contig: lc38171.
FX645698.1:305-328

TTCATGTTTGGGGCGTCAAGAGAGCATGCT305CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATNACATTCAANCTTCNCAC

TSA: Pyrus communis mRNA, contig: lc39115.
FX646559.1:241-264

TTCATGTTTGGGGCGTCAAGAGAGCATGCT241CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGNGNGGCTTCN

TSA: Pyrus communis mRNA, contig: lc39840.
FX647212.1:263-286

AGGTGTTTCATGNCNTCAAGAGAGCATGCT263CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTANANAAGAAGANAAGGCTT

TSA: Pyrus communis mRNA, contig: lc39934.
FX647294.1:288-311

TTCATGTTTGGGGCNTCAAGATAGCATGCT288CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANATTCAANGNGGCTNCACAGNA

TSA: Pyrus communis mRNA, contig: lc41519.
FX648681.1:207-230

TTCATGTTTGGGGCGTCAAGAGAGCATGCT207CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGNAGGCTT

TSA: Pyrus communis mRNA, contig: lc42837.
FX649828.1:202-225

TTCATGTTTGGGGCGTCAAGAGAGCATGCT202CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc45948.
FX652569.1:259-282

TTCATGTTTGGGGCGTCAAGAGAGCATGCT259CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc67554.
FX656676.1:282-305

TTCATGTTTGGGGCGTCAAGAGAGCATGCT282CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGNGGCTTC

TSA: Pyrus communis mRNA, contig: lc77727.
FX656887.1:308-331

GTGTTTCATGTTTNCNCAAGAGAGCATGCT308CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACA

TSA: Pyrus communis mRNA, contig: lc84797.
FX657010.1:281-304

TGTTTCATGTTTNCGTCAAGAGAGCATGCT281CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATNCAAGAAGNGGCNCA

TSA: Pyrus communis mRNA, contig: lc85825.
FX657043.1:272-295

TTCATGTTTGGGGCGTCAAGAGAGCATGCT272CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACATTCAAGAAGAAAAGGCTT

TSA: Pyrus communis mRNA, contig: lc86501.
FX657060.1:252-275

TTCATGTTTGGGGCGTCAAGAGAGCATGCT252CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTACATTCAAGAAGAAAAGGCT

TSA: Pyrus communis mRNA, contig: lc92415.
FX657197.1:274-297

TTTCATGTTTGGGGCTCAAGAGAGCATGCT274CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc92494.
FX657199.1:189-212

TTCATGTTTGGGGCGTCAAGAGAGCATGCT189CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACATTCAAGAAGAAAAGGCTT

TSA: Pyrus communis mRNA, contig: lc92707.
FX657202.1:264-287

TTCATGTTTGGGGCGTCAAGAGAGCATGCT264CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

TSA: Pyrus communis mRNA, contig: lc98738.
FX657295.1:321-344

TTCATGTTTGGGGCGTCAAGAGAGCATGCT321CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC

Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:29807985-29808008

TTCATGTTTGGGGCGTCAAGAGAGCATGCT29807985CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAAGG

Malus x robusta genome assembly, chromosome: 15.
OY720339.1:30415973-30415996

TTCATGTTTGGGGCGTCCAGAGAGCATGCT30415973CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAAGG

Data Export:

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Debug Info:

0.008 | 0.008 | search_start;
0.762 | 0.754 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGTCCTGTTTCCTTTTCGTTAC&k=0&no_gap=0&offset=0&limit=50
0.835 | 0.073 | search_minus_done; http://172.18.8.135:50400/match?q=GTAACGAAAAGGAAACAGGACTTG&k=0&no_gap=0&offset=0&limit=0
0.835 | 0.000 | cgi_end;

Summary:

Results:

Data Export:

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