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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 07:05:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

E012697-024-021-H11-SP6 MPIZ-ADIS-024-developing root Beta vulgaris cDNA clone 024-021-H11 5-PRIME, mRNA sequence.
BQ592100.1:373-393
ATTATTCATCAAATCTGAATATGAATTCAC373CACTCCACACTTCAGCATCAGTACCCTTTAGTTGGGAAGAACAACCTGGAA
E012698-024-021-H12-SP6 MPIZ-ADIS-024-developing root Beta vulgaris cDNA clone 024-021-H12 5-PRIME, mRNA sequence.
BQ592282.1:375-395
ATTATTCATCAAATCTGAATATGAATTCAC375CACTCCACACTTCAGCATCAGGACCCTTTAGTTGGGAAGAACAACCTGGAA
Giardia intestinalis strain Be-2 chromosome 3.
CP110918.1:1210015-1210035
GTAAAGTTTGAAAGGGTCTATAGCCTGGCC1210015CACTCCACACTTCAGCATCAGATTTACAGTCTTACGTGCTTTGGATCTGTT
46-L108087-1033-121-K11-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-121-K11 3', genomic survey sequence.
JY351848.1:357-377
TTCCAGGTTGTTCTTCCCAACTAAAGGGTA357CTGATGCTGAAGTGTGGAGTGGTGAATTCATATTCAGATTTGATGAATAAT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:3081962-3081982
TTCCAGGTTGTTCTTCCCAACTAAAGGGTA3081962CTGATGCTGAAGTGTGGAGTGGTGAATTCATATTCAGATTTGATGAATAAT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:3296773-3296793
TTCCAGGTTGTTCTTCCCAACTAAAGGGTA3296773CTGATGCTGAAGTGTGGAGTGGTGAATTCATATTCAGATTTGATGAATAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACTCCACACTTCAGCATCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTCCACACTTCAGCATCAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.144 | 0.135 | search_plus_done; http://172.18.8.135:50400/match?q=CACTCCACACTTCAGCATCAG&k=0&no_gap=0&offset=0&limit=50
0.206 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=CTGATGCTGAAGTGTGGAGTG&k=0&no_gap=0&offset=0&limit=47
0.208 | 0.002 | cgi_end;

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