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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 02:26:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Zeus faber genome assembly, chromosome: 10.
OY482854.1:16238283-16238302
TCTCGACAATCGTTCATCCGTTCTACTTCA16238283CACTTGGAGGGTTTATTGCTGGGGACCCAAGGGCATGCGGTGTCGAATTT
TSA: Cannabis sativa PK08128.1_1.CasaPuKu mRNA sequence.
JP449761.1:993-1012
GAGATGATGATGATGATGATGATGATGAAA993CACTTGGAGGGTTTATTGCTGGTGATGATGAATTGGACCAAGAGGAAGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq1.
LA703859.1:2960-2979
TTCTTCTTCTTGGTCCAATTCATCATCACC2960AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq2.
LA703860.1:2401-2420
TTCTTCTTCTTGGTCCAATTCATCATCACC2401AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq3.
LA703861.1:3049-3068
TTCTTCTTCTTGGTCCAATTCATCATCACC3049AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq4.
LA703862.1:2490-2509
TTCTTCTTCTTGGTCCAATTCATCATCACC2490AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq5.
LA703863.1:3049-3068
TTCTTCTTCTTGGTCCAATTCATCATCACC3049AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq6.
LA703864.1:1840-1859
TTCTTCTTCTTGGTCCAATTCATCATCACC1840AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq7.
LA703865.1:2490-2509
TTCTTCTTCTTGGTCCAATTCATCATCACC2490AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq8.
LA703866.1:2401-2420
TTCTTCTTCTTGGTCCAATTCATCATCACC2401AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq9.
LA703867.1:2960-2979
TTCTTCTTCTTGGTCCAATTCATCATCACC2960AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp297318_c1_seq10.
LA703868.1:1840-1859
TTCTTCTTCTTGGTCCAATTCATCATCACC1840AGCAATAAACCCTCCAAGTGTTTCATCATCATCGTCGTCATCTCTGTCAA
Humulus lupulus genome assembly, chromosome: 8.
OY720655.1:9163938-9163957
TTCTTCTTCTTGGTCCAATTCATCATCACC9163938AGCAATAAACCCTCCAAGTGTTTCATCATCGTCGTCATCTCTGTCAATCT
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:900959147-900959166
CTGGACAATGCAGGAAAGGGTTTCTTCCTC900959147AGCAATAAACCCTCCAAGTGTCATGAGATACTGCAGAACATGTCCAAGAA
Anaerobacillus isosaccharinicus strain NB2006 chromosome, complete genome.
CP063356.1:4386946-4386965
AATCAATACTGTAGTAATAGCTGTTAATCC4386946AGCAATAAACCCTCCAAGTGTCCACGCTTTCAGTGTTTGGACGACAGTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACTTGGAGGGTTTATTGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTTGGAGGGTTTATTGCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.124 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=CACTTGGAGGGTTTATTGCT&k=0&no_gap=0&offset=0&limit=50
0.329 | 0.205 | search_minus_done; http://172.18.8.135:50400/match?q=AGCAATAAACCCTCCAAGTG&k=0&no_gap=0&offset=0&limit=48
0.337 | 0.009 | cgi_end;

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