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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 03:25:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Bemisia tabaci genome assembly, chromosome: 6.
OU963867.1:14717585-14717604
CTCTCTTCGCTATTGAAGCAGACGTGACCT14717585CACTTTCGATTTTCCCCTGAGAAAAGAGCGATTACAGCTCAAGGAACCCC
Bathymodiolus brooksi genome assembly, chromosome: 10.
OY804584.1:98663513-98663532
ATGAAGAACAACAATGAGAGCGCTGTTCGT98663513CACTTTCGATTTTCCCCTGAAATACAGCTGTCATTTGCATCCATGTCTTT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2650565-2650584
TTTGAGTCCTTAATTTTCCAATAGAAAAGT2650565TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2760610-2760629
TTTGAGTCCTTAATTTTTCAATAGAAAAGT2760610TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2748872-2748891
TTTGAGTCCTTAATTTTTCAATAGAAAAGT2748872TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2823529-2823548
TTTGAGTCCTTAATTTTCCAATAGAAAAGT2823529TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2863486-2863505
TTTGAGTCCTTAATTTTCCAATAGAAAAGT2863486TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Bathymodiolus septemdierum genome assembly, chromosome: 13.
OY726529.1:12350548-12350567
AAAGACATGGATGCAAATGACAGCTGTATT12350548TCAGGGGAAAATCGAAAGTGACGAACAGCGCTCTCATTGTTGTTCTTCAT
Tipula helvola genome assembly, chromosome: 2.
OY744482.1:60057539-60057558
GTAAATCTGTTGAAATGTTACAGTTCCTGA60057539TCAGGGGAAAATCGAAAGTGTTTATTAGTAAGATAGAGAGTTGTATACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACTTTCGATTTTCCCCTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTTTCGATTTTCCCCTGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=CACTTTCGATTTTCCCCTGA&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGGGGAAAATCGAAAGTG&k=0&no_gap=0&offset=0&limit=48
0.130 | 0.005 | cgi_end;

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