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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:13:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chanos chanos genome assembly, chromosome: 2.
LR697107.1:25425817-25425836
TCTTGATCTCAAGCCAGTTTTCAGTAAGTC25425817CAGAGCAACGTCTCTCCCTCACAGACCCTATGACTGCGCCATAGACCTTT
Arachis hypogaea cultivar Shitouqi chromosome A02.
CP030984.1:3107464-3107483
CTCGTCTCGTTCTTTTTCGTGCCAAGCTTC3107464CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTCAGTTTTACTATCTAA
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:122217736-122217755
TCGTTTTCCTTCTTCTTCGCGCCAAGATCA122217736CAGAGCAACGTCTCTCCCTCTTTCTTTGACCTTTCAGTTTTACTCCTAGT
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:2968428-2968447
TCGTTTTCCTTCTTCTTCGCGCCAAGATCA2968428CAGAGCAACGTCTCTCCCTCTTTACTTGACCTTTCAATTTTACTCCTAGT
Arachis hypogaea cultivar Shitouqi chromosome A08.
CP030990.1:9825719-9825738
CTTGTATCGTTCTTTTTCGCGCCAAGCTTC9825719CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTCGCTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:93124096-93124115
GGCTTCTCGTTCTTCTTCGTGCCAAGCTTC93124096CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTAAGTTTTACTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:106678271-106678290
TCGTTTTCCTTCTTTTTCACGCCAAGATCA106678271CAGAGCAACGTCTCTCCCTCTTTACTTGACCTTTCAGTTTTACTCCTGGT
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:106017247-106017266
TCATTTTCGTTCTTCTTCGCGCCAAGAGTC106017247CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTTAGTGTTACTCCTAGT
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:141186932-141186951
CTAGTATCGTTCTTCTTCGCGCCAAGCTTC141186932CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTTACTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:3772433-3772452
CTCGTCTCATTCTTCTTCGCACCAAGCTTC3772433CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTCAGTTTTACTATCTAA
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:9034574-9034593
CTAGTCTCGTTCTTCTTCGCGCCAAGCTTC9034574CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTTACTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:9253021-9253040
TTGTTTTCGTTCTTCTTCGCGCCAAGATTC9253021CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCACTTTTACTCCTAGT
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:4666077-4666096
TCGTCTTCGTTCTTCTTTGCGCCAAGTAAC4666077CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCAGTTTTACTCTTAGT
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:21983194-21983213
TCGTTTTCGTTCTTCTTCGCGCCAAGCTTC21983194CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCAGTTTTACTCCTAGT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:17036872-17036891
CTAGTATCGTTCTTCTTCGCGCCAAGCTTC17036872CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAATTTCACTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:17106486-17106505
CTAGTATCGTTCTTCTTCGCGCCAAGCTTC17106486CAGAGCAACGTCTCTCCCTCTCTACGTGACATTTGAATTTCACTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:26090405-26090424
CTAGTCTCGTTCTTCTTCGCGCCAAGCTTC26090405CAGAGCAACGTCTCTCCCTCTCTATGTGACCTTTGAGTTTTACTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:36762164-36762183
TCGTCTTCGTTCTTCTTCGCGCCAAGTAAC36762164CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCACTTTTACTCTTAGT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:20668704-20668723
CTTGTATCGTTCTTCTTCGCGCCAAGCTTC20668704CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTCGCTAGTAGT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:130524917-130524936
CTTGTATCGTTCTTCTTCGCGCCAAGCTTC130524917CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTGTATGCTGGTAG
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:22403206-22403225
CACGTCGTTTCGTTCTTCGTGCGAAGCTTC22403206CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTTAGTTTTACATGCAGT
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:141139531-141139550
CTAGTATCGTTCTTCTTCGCGCCAAGCTTC141139531CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTTACTAGTAGT
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:3874860-3874879
CTCGTCTCATTCTTCTTCGCACCAAGCTTC3874860CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTCAGTTTTACTATCTAA
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:9238527-9238546
CTAGTCTCGTTCTTCTTCGCGCCAAGCTTC9238527CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTTACTAGTAGT
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:9453338-9453357
TTGTTTTCGTTCTTCTTCGCGCCAAGATTC9453338CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCACTTTTACTCCTAGT
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:4744752-4744771
TCGTCTTCGTTCTTCTTTGCGCCAAGTAAC4744752CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCAGTTTTACTCTTAGT
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:28497948-28497967
TCGTTTTCGTTCTTCTTCGCGCCAAGCTTC28497948CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCAGTTTTACTCCTAGT
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:17929305-17929324
CTAGTATCGTTCTTCTTCGCGCCAAGCTTC17929305CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAATTTCACTAGTAGT
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:18030367-18030386
CTAGTATCGTTCTTCTTCGCGCCAAGCTTC18030367CAGAGCAACGTCTCTCCCTCTCTACGTGACATTTGAATTTCACTAGTAGT
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:27040701-27040720
CTAGTCTCGTTCTTCTTCGCGCCAAGCTTC27040701CAGAGCAACGTCTCTCCCTCTCTATGTGACCTTTGAGTTTTACTAGTAGT
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:37976642-37976661
TCGTCTTCGTTCTTCTTCGCGCCAAGTAAC37976642CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCACTTTTACTCTTAGT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:20570109-20570128
CTTGTATCGTTCTTCTTCGCGCCAAGCTTC20570109CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTTTCGCTAGTAGT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:127902067-127902086
CTTGTATCGTTCTTCTTCGCGCCAAGCTTC127902067CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTGAGTGTATGCTGGTAG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:23180925-23180944
CACGTCGTTTCGTTCTTCGTGCGAAGCTTC23180925CAGAGCAACGTCTCTCCCTCTCTACGTGACCTTTTAGTTTTACATGCAGT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:143327703-143327722
TTGTCTTCGTTCTTCTTCCCGCCAAGAGTC143327703CAGAGCAACGTCTCTCCCTCTTTACGTGACCTTTCAGTTTTACTCCTAGT
Cottoperca gobio genome assembly, chromosome: 23.
LR131931.1:14896894-14896913
ACAACAGGAGATCTGTAAAGGACGCTGGAG14896894GAGGGAGAGACGTTGCTCTGTTGCTTATCATGCGTTTGCTGCTGTGATCA
Chanos chanos genome assembly, chromosome: 9.
LR697114.1:42134827-42134846
GTAAAAGGTCACAGTCATAGGGTCTGTGAG42134827GAGGGAGAGACGTTGCTCTGGACTTACTGAAAACTGGCTTGAGATCAAGC
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:122169737-122169756
ACTAGGAGTAAAACTGAAAGGTCAAAGAAA122169737GAGGGAGAGACGTTGCTCTGTGATCTTGGCGCGAAGAAGAAGGAAAACGA
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:85781874-85781893
ACTAAGAGTAAAACTGAAAGGTCACGTAAA85781874GAGGGAGAGACGTTGCTCTGGAAGCTTGGCGCGAAGAAGAACGAAAACGA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:78606208-78606227
AATACTAGTAAAACTCAAAGGTCACGTAGA78606208GAGGGAGAGACGTTGCTCTGGAAGCTTGGCACGAAGAAGAACGAGACTAG
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:106407549-106407568
ACTAGGAGTAAAACTGAAAGGTCACGTAAA106407549GAGGGAGAGACGTTGCTCTGGACTCTTGGCGCAAAGAAGAACGAAGACGA
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:79271226-79271245
ACTACTAGCAAAACTCAAAGGTCACGTAGA79271226GAGGGAGAGACGTTGCTCTGGAAGCTTGGCGCGAAGAAGAACGAGACTAG
Arachis hypogaea cultivar Shitouqi chromosome A08.
CP030990.1:11867513-11867532
ACTAAGAGTAAAACTGAAAGGTCACGTAAA11867513GAGGGAGAGACGTTGCTCTGGTTACTTGGCGCGAAGAAGAACGAAGACGA
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:12936915-12936934
ACTACTAGCGAAACTCAAAGGTCACGTAGA12936915GAGGGAGAGACGTTGCTCTGGAAGCTTGGCGCGAAGAAGAACGATACTAG
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:121481248-121481267
AATAAGAGTAAAACTGAAAGGTCACGTAAA121481248GAGGGAGAGACGTTGCTCTGGTTACTTGGCGCGAAGAAGAACGAAGACGA
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:121481339-121481358
TTGTCGAAGTCGACTGAAAGGTCACGTAAA121481339GAGGGAGAGACGTTGCTCTGGTTACTTGGCGCGAAGAAGAACGAAGACGA
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:36615509-36615528
ACTAAGAGTAAAACTCAAAGGTCACGTAAA36615509GAGGGAGAGACGTTGCTCTGGTAACTTGGCGCGAAGAAGAACGAAGACGA
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:111600913-111600932
ACTACGTGTAAAATTGAAAGGTCACGTAGA111600913GAGGGAGAGACGTTGCTCTGAAAGCTTGGCGCGAAGAAGAACTAGACGAT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:144198244-144198263
ACTAGGAGTAAAACTGAAAGGTCACGTAAA144198244GAGGGAGAGACGTTGCTCTGGACTCTTGGCGGGAAGAAGAACGAAGACAA
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:12987561-12987580
ACTACTAGCGAAACTCAAAGGTCACGTAGA12987561GAGGGAGAGACGTTGCTCTGGAAGCTTGGCGCGAAGAAGAACGATACTAG
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:113679713-113679732
ACTAGGAGTAACACTAAAAGGTCACGTAAA113679713GAGGGAGAGACGTTGCTCTGGACTCTTGGCGCGAAGAAGAACGAAAATGA
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:36778236-36778255
ACTAAGAGTAAAACTCAAAGGTCACGTAAA36778236GAGGGAGAGACGTTGCTCTGGTAACTTGGCGCGAAGAAGAACGAAGACGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGAGCAACGTCTCTCCCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGAGCAACGTCTCTCCCTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.120 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=CAGAGCAACGTCTCTCCCTC&k=0&no_gap=0&offset=0&limit=50
0.183 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGGAGAGACGTTGCTCTG&k=0&no_gap=0&offset=0&limit=15
0.194 | 0.011 | cgi_end;

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