GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 08:39:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Heterocephalus glaber genome assembly, chromosome: 10.
OX090950.1:2741748-2741767
ATAACTGGATGCACATTCTGCTCCTGGACC2741748CATCTGTGTTTGCTGCAGCTGCAGTGGACACTTCCTGGACATGCGAACAG
EG-E11_002_D07 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_002_D07, mRNA sequence.
JK668629.1:219-238
TGTAGAATGGGTGAGAACCATACAGATTTA219CATCTGTGTTTGCTGCAGCTATGTCAGAATTCCACATCGTTAAACTGTCA
Elaeis guineensis EST, clone (6lib)_isotig23631.
LM613514.1:2430-2449
TGTAGAATGGGTGAGAACCATACAGATTTA2430CATCTGTGTTTGCTGCAGCTATGTCAGAATTCCACATCGTTAAACTGTCA
Pinctada fucata DNA, chromosome 13, nearly complete sequence, Principal Pseudohaplotype.
AP027114.1:22639577-22639596
CAATCGTCGTCGGAGTCTTGCGTAAGTAGG22639577CATCTGTGTTTGCTGCAGCTTGAAGATCTATGTTGTAATCTTTTTTAAGC
Heterocephalus glaber genome assembly, chromosome: 10.
OX090918.1:55619178-55619197
CTGTTCGCATGTCCAGGAAGTGTCCACTGC55619178AGCTGCAGCAAACACAGATGGGTCCAGGAGCAGAATGTGCATCCAGTTAT
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001077.1:93648722-93648741
CTGTTCGCATGTCCAGGAAGTGTCCACTGC93648722AGCTGCAGCAAACACAGATGGGTCCAGGAGCAGAATGTGCATCCAGTTAT
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001120.1:93107296-93107315
CTGTTCGCATGTCCAGGAAGTGTCCACTGC93107296AGCTGCAGCAAACACAGATGGGTCCAGGAGCAGAATGTGCATCCAGTTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCTGTGTTTGCTGCAGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCTGTGTTTGCTGCAGCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.274 | 0.265 | search_plus_done; http://172.18.8.135:50400/match?q=CATCTGTGTTTGCTGCAGCT&k=0&no_gap=0&offset=0&limit=50
0.291 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=AGCTGCAGCAAACACAGATG&k=0&no_gap=0&offset=0&limit=46
0.293 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).