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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-26 08:31:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 4.
OX090912.1:6745071-6745090
CTGTATAATATATCTTGATTCTTTTTTCCC6745071CATTCTCCTTCTTCCCCTCCTTATTTACAAAAACTTTGTTTCCATTTTTT
Heterocephalus glaber genome assembly, chromosome: 4.
OX090944.1:118711871-118711890
CTGTATAATATATCTTGATTCTTTTTTCCC118711871CATTCTCCTTCTTCCCCTCCTTATTTACAAAAACTTTGTTTCCATTTTTT
Heterocephalus glaber genome assembly, chromosome: 5.
OZ001070.1:3845071-3845090
CTGTATAATATATCTTGATTCTTTTTTCCC3845071CATTCTCCTTCTTCCCCTCCTTATTTACAAAAACTTTGTTTCCATTTTTT
Heterocephalus glaber genome assembly, chromosome: 5.
OZ001113.1:4462573-4462592
CTGTATAATATATCTTGATTCTTTTTTCCC4462573CATTCTCCTTCTTCCCCTCCTTATTTACAAAAACTTTGTTTCCATTTTTT
Micromys minutus genome assembly, chromosome: 3.
OZ004783.1:26494639-26494658
TTTTTTGTTTGTTTTTGAGATATTCTCATT26494639CATTCTCCTTCTTCCCCTCCTCCTCCCACTCTCCCTCCTTCCCCCTACAC
Sarcophilus harrisii genome assembly, chromosome: 4.
LR735557.1:114783948-114783967
CTTTCTTCTCCCTTTTCTTCTCTTTATTTC114783948CATTCTCCTTCTTCCCCTCCTGTTTCCTACTTCCTTTTGTAAATTAAGAT
Lutra lutra genome assembly, chromosome: 7.
LR738409.1:59107444-59107463
AGCATGGAGCCTACTTAAGATTCTCTTTCT59107444CATTCTCCTTCTTCCCCTCCCTAATCTCTCACTATCTCTAAAAATTAAGA
Pipistrellus pygmaeus genome assembly, chromosome: 5.
OX465307.1:98975120-98975139
TTGATATTTCACCAGACTTTCCACTAATGC98975120CATTCTCCTTCTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
Betta splendens genome assembly, chromosome: 15.
LR132021.3:16228279-16228298
TCCTGTCCATGTGTCCCACACGTTTCCCTC16228279CATTCTCCTTCTTCCCCTCCTTCACGCTCCATAGCCGACTTTGGCGTCTC
Rhinatrema bivittatum genome assembly, chromosome: 18.
LR584404.1:21466253-21466272
TTTCTTCTCTGCCCTTCCTTCCTCACATGG21466253CATTCTCCTTCTTCCCCTCCTTGTCTCCTCACTCACACTACCTCCCTCTC
Labrus mixtus genome assembly, chromosome: 16.
OY757299.1:6387042-6387061
CAGACTGGGCCACCCCTCTCCCCAACTCCT6387042CATTCTCCTTCTTCCCCTCCCCCACCAGACCCCATTTCCAATCCAGAGGG
Chroicocephalus ridibundus genome assembly, chromosome: 2.
OZ001734.1:164081707-164081726
AGAGCTGCATCAGAAACAACTCACAGAAAC164081707CATTCTCCTTCTTCCCCTCCCCATAACACTGTTGAAGACCCAAACTGTCC
Labrus bergylta genome assembly, chromosome: 19.
OZ005727.1:5578675-5578694
CAGACCGGGCCACCCCTCTCCCCAACTCCT5578675CATTCTCCTTCTTCCCCTCCCCCACCAGACCCCATTTCCAATCCAGAGGG
TSA: Camellia sinensis Singletons29989.Casi mRNA sequence.
HP743673.1:204-223
TTACCATGACTACTTCTCCTAATGCTACTG204CATTCTCCTTCTTCCCCTCCACCATTCTCACAATCAGACCCAGACACACT
TSA: Fagopyrum esculentum Unigene18324_laojing mRNA sequence.
JW679627.1:353-372
CAATACCTTCATCATTCTCAATCTCAATAT353CATTCTCCTTCTTCCCCTCCACAACCACCGTCAAACCCTCATCGGTCGCC
TSA: Fagopyrum esculentum Unigene18325_laojing mRNA sequence.
JW679628.1:353-372
CAATACCTTCATCATTCTCAATCTCAATAT353CATTCTCCTTCTTCCCCTCCACAACCACCGTCAAACCCTCATCGGTCGCC
nbxb0043N10r CUGI Rice BAC Library Oryza sativa Japonica Group genomic clone nbxb0043N10r, genomic survey sequence.
AQ328838.1:541-560
TCTTCTCAATTTTCCTTTTTATCTGCTTCT541CATTCTCCTTCTTCCCCTCCTTCTCCTCTACTCATACTATCATCTTTCAT
CH261-63B12_Sp6.1 CH261 Gallus gallus genomic clone CH261-63B12, genomic survey sequence.
CC251828.1:1116-1135
CCCCTCTCCTCCTCATTCCTCCTCTCCCTT1116CATTCTCCTTCTTCCCCTCCTCCCTTCCTTCCTCCCTTACCCCCCTCCTA
Cryptococcus wingfieldii strain CBS7118 chromosome 8, complete sequence.
CP034268.1:126445-126464
CTGACATTGTCGTACGTCCCCCTCCCCCTC126445CATTCTCCTTCTTCCCCTCCACTCCTCCGAACGTCGAACACTGACATGAC
Cenchrus purpureus cultivar elephant grass chromosome B1.
CP053461.1:112881109-112881128
GCGCCGGCGGTTCCTCCGGCCTGCCCTGTC112881109CATTCTCCTTCTTCCCCTCCCTCCCTCCCTCCCTTGGGGTTTCTGCAACC
Warburgia ugandensis isolate CL-2023a chromosome 12.
CP141137.1:20882548-20882567
TTCCTCCTCCTTCCCTCCTTCCCTCCTTCC20882548CATTCTCCTTCTTCCCCTCCTTTCTTCTCTTCTCCCCATTTTGTTCTTCC
Cryptococcus decagattii strain 7685027 chromosome 10.
CP143815.1:15079-15098
GCATATAAGCACAAGTCTACTAAGCAGTAA15079CATTCTCCTTCTTCCCCTCCCCCCAGCAAACATCACCACTTTCATCTTCA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828098.1:1096672-1096691
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT1096672CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828143.1:988997-989016
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT988997CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828143.1:560727877-560727896
NNNNNNNNNNNNNNNNNNNGAAGGAGGGCT560727877CATTCTCCTTCTTCCCCTCCTTCTCCTTCTTCTTCTCTTCTTCTCCTCCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828150.2:340062-340081
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT340062CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828171.1:792902-792921
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT792902CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OU701467.1:311593025-311593044
AGAAGAAGAAGAAGGAGAAGAAGGAGGGCT311593025CATTCTCCTTCTTCCCCTCCTTCACCTTCTTCTTCTCTTCTTCTTCGTCT
Hordeum vulgare genome assembly, chromosome: 5H.
OX459913.1:2624712-2624731
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT2624712CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460030.1:361785674-361785693
GAGAGAAGAAGAAGGAGAAGAAGGAGGGCT361785674CATTCTCCTTCTTCCCCTCCTTCACCTTCTTCTTCTCTTCTTCTTCGTCT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460099.1:3225695-3225714
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3225695CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460135.1:346547662-346547681
GAGAGAAGAAGAAGGAGAAGAAGGAGGGCT346547662CATTCTCCTTCTTCCCCTCCTTCACCTTCTTCTTCTCTTCTTCTTCGTCT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460149.1:3313040-3313059
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3313040CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460156.1:991073-991092
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT991073CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460198.1:3253248-3253267
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3253248CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460275.1:3946941-3946960
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3946941CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460275.1:3962517-3962536
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3962517CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460282.1:988364-988383
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT988364CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460310.1:519381697-519381716
GAGAGAAGAAGAAGGAGAAGAAGGAGGGCT519381697CATTCTCCTTCTTCCCCTCCTTCTCCTTCTTCTTCTCTTCTTCTCCTCCT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638753.1:3385974-3385993
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3385974CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638782.1:170723817-170723836
AAGGAGGAAGAATAAGGAGAAGGAGGAGCT170723817CATTCTCCTTCTTCCCCTCCTTCTTCTCCTCCTTCTTCTCCTTCTTCTTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX638795.1:3294566-3294585
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT3294566CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638816.1:1064677-1064696
AAGAAGGAGGAACAAGGAGAAGGAGGAGCT1064677CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTTCTTATCGTCCTCCCTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:341231872-341231891
GAGAGAAGAAGAAGGAGAAGAAGGAGGGCT341231872CATTCTCCTTCTTCCCCTCCTTCACCTTCTTCTTCTCTTCTTCTTCGTCT
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737396.1:19936239-19936258
AGGAGAAGGAGAAGGAGGAGGAGGAGAAGA19936239CATTCTCCTTCTTCCCCTCCTTCTCCTCCTTCTCCTTCTTCTCTTGTTCT
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737493.1:250277948-250277967
AGGAGAAGGAGGAGGAGGAGAAGTAGGACT250277948CATTCTCCTTCTTCCCCTCCTTCTCCTTCTTATTCTCCTTCTTCTTCTCT
Hordeum bulbosum genome assembly, chromosome: 5H_3.
OY737658.1:259016539-259016558
AGGAGAAGGAGGAGGAGGAGAAGTAGGACT259016539CATTCTCCTTCTTCCCCTCCTTCTCCTTCTTATTCTCCTTCTTCTTCTCT
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY737877.1:258215386-258215405
AGGAGAAGGAGGAGGAGGAGAAGTAGGACT258215386CATTCTCCTTCTTCCCCTCCTTCTCCTTCTTATTCTCCTTCTTCTTCTCT
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:361340002-361340021
ATAAAAAGGGGGAGGGACGGTGCCTTTCCG361340002CATTCTCCTTCTTCCCCTCCTTCTGCTTAGTATCCTTCTTCCATTCGCCA
Diaphorina citri isolate DC chromosome 7.
CP125324.1:4127208-4127227
TCCCTCTTCCTTTTTTTCCTCTCCTTCCCT4127208CATTCTCCTTCTTCCCCTCCTCTATTATTCCTTCTCCTTCCTCTCTCCTC
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0152210.
LN171953.1:1952-1971
AACACCCATTTCGCTCTTCCTCGTCTTGCC1952CATTCTCCTTCTTCCCCTCCTCCTCCTTTTCGCCGCCGCAATCGCCAGAC
Stelis phaeoptera genome assembly, chromosome: 6.
OX030935.1:16741186-16741205
TTTGAATAAGGTACACACGGAACACCTTTC16741186CATTCTCCTTCTTCCCCTCCTTTCTTTCTTTCTTTCCTTCTTTGCTTAGC
Octopus vulgaris genome assembly, chromosome: 22.
OX597835.1:37431421-37431440
CTGTTGTACTCTTTTCCCCCTCTTCCTCCT37431421CATTCTCCTTCTTCCCCTCCTCTTCCTCCCCGTCTCCCTCCTCTCTACCC
Leptopterna dolabrata genome assembly, chromosome: 1.
OX940975.1:33408427-33408446
CAAGTTACGGACAGGAGGAAAAATGCTTTT33408427CATTCTCCTTCTTCCCCTCCACCAACCGATATACCAACCAACATATCTGT
Pyrrhosoma nymphula genome assembly, chromosome: 3.
OY754329.1:129097177-129097196
GTCCTACCCTTGTTCATCCTGCCCATAAAA129097177CATTCTCCTTCTTCCCCTCCCCGCTTGCCCAACATTCTCTCCATCACGGC
Pyrrhosoma nymphula genome assembly, chromosome: 4.
OY754330.1:45661723-45661742
CCTATCTCCTTTTATCCCGTTCCTATATCT45661723CATTCTCCTTCTTCCCCTCCCCTACTTATCCAACATTCTCCGCCTCCATC
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:136664649-136664668
GTTAATATCAAGGAAAAATCAACTAATTAG136664649CATTCTCCTTCTTCCCCTCCCCCCCCCCCCCTTAAATCTGACACAAATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTCTCCTTCTTCCCCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTCTCCTTCTTCCCCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=CATTCTCCTTCTTCCCCTCC&k=0&no_gap=0&offset=0&limit=50
0.236 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGGGGAAGAAGGAGAATG&k=0&no_gap=0&offset=0&limit=0
0.236 | 0.000 | cgi_end;

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