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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 07:40:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4355999-4356018
GACTCGACAGCTTCTAGCTTTCCCATCGAT4355999CCAAACCTGTGACACTTGCACCAGGCTTCTATGTATCAGTTCAGTCAAGT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4386722-4386741
GACTCGACAGCTTCTAGCTTTCCCATCGAT4386722CCAAACCTGTGACACTTGCACCAGGCTTCTATGTATCAGTTCAGTCAAGT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3319252-3319271
GACTCGACAGCTTCTAGCTTTCCCATCGAT3319252CCAAACCTGTGACACTTGCACCAGGCTTCTATGTATCAGTTCAGTCAAGT
Tipula lateralis genome assembly, chromosome: 3.
OZ010738.1:55713699-55713718
AGGAATGGCCAAGTTGATCAAAATATACAC55713699CCAAACCTGTGACACTTGCAACGCAAATAAATATGATCGACATCCCCATC
Acomys russatus genome assembly, chromosome: 1.
LR877212.1:40107384-40107403
ATTCCCTGTTGGAGTCAGCTTGGCGTGACT40107384TGCAAGTGTCACAGGTTTGGGCTGTGTGAATGAAGCAGTTACAGGGCAGC
Acomys dimidiatus genome assembly, chromosome: 1.
OU015374.1:121791256-121791275
GTTCCCTGTTGGAGTCAGCTTGGAGTGACT121791256TGCAAGTGTCACAGGTTTGGGCTGTGTGAATGAGGCAATTACAGGGCAGC
Pipistrellus nathusii genome assembly, chromosome: 15.
OY882872.1:38998168-38998187
AATCCTAAGGCCTAGAAAGCATTGTTCACT38998168TGCAAGTGTCACAGGTTTGGGCTCCAGTTGTGAGTGTCCCCCCACCCAAC
Scyliorhinus canicula genome assembly, chromosome: 6.
LR744035.1:87027266-87027285
TGCCTTGGTGGAATGCGGAGAGGCCGTGTG87027266TGCAAGTGTCACAGGTTTGGGGGTGTGCAGGTTTCGGGGTGGGGGGGGAA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40129409-40129428
ACTTGACTGAACTGATACATAGAAGCCTGG40129409TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40158576-40158595
ACTTGACTGAACTGATACATAGAAGCCTGG40158576TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29590411-29590430
ACTTGACTGAACTGATACATAGAAGCCTGG29590411TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAAAAGCTGTCGAGTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29627494-29627513
ACTTGACTGAACTGATACATAGAAGCCTGG29627494TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27948578-27948597
ACTTGACTGAACTGATACATAGAAGCCTGG27948578TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27972427-27972446
ACTTGACTGAACTGATACATAGAAGCCTGG27972427TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29572213-29572232
ACTTGACTGAACTGATACATAGAAGCCTGG29572213TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29235508-29235527
ACTTGACTGAACTGATACATAGAAGCCTAG29235508TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29268684-29268703
ACTTGACTGAACTGATACATAGAAGCCTGG29268684TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAAAAGCTGTCGAGTC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27964054-27964073
ACTTGACTGAACTGATACATAGAAGCCTGG27964054TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAAAAGCTGTCGAGTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25949102-25949121
ACTTGACTGAACTGATACATAGAAGCCTAG25949102TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25978034-25978053
ACTTGACTGAACTGATACATAAAAGCCTAG25978034TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:25983497-25983516
ACTTGACTGAACTGATACATAGAAGCCTGG25983497TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAAAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26004565-26004584
ACTTGACAGAACTGATACATAGAAGCCTGG26004565TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCAAGTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26068953-26068972
ACTTGACTGAACTGATACATAGAAGCCTGG26068953TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAAAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29754683-29754702
ACTTGACTGAACTGATACATAGAAGCCTAG29754683TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29783615-29783634
ACTTGACTGAACTGATACATAAAAGCCTAG29783615TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU744953.1:29157901-29157920
ACTTGACTGAACTGATACATAGAAGCCTGG29157901TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAAAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26228351-26228370
ACTTGACTGAACTGATACATAGAAGCCTAG26228351TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26257289-26257308
ACTTGACTGAACTGATACATAAAAGCCTAG26257289TGCAAGTGTCACAGGTTTGGATCGATGGGAAAGCTAGAAGCTGTCGAGTC
Andrena bicolor genome assembly, chromosome: 4.
OY482667.1:18162998-18163017
GGATCCTACCAGTCTAGTACAGACGAGTCA18162998TGCAAGTGTCACAGGTTTGGACGGTCTTATTCTCAGTTCCTCCCACGTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAACCTGTGACACTTGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAACCTGTGACACTTGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAACCTGTGACACTTGCA&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=TGCAAGTGTCACAGGTTTGG&k=0&no_gap=0&offset=0&limit=46
0.143 | 0.016 | cgi_end;

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