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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 04:45:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pongo pygmaeus isolate org01 L1 cell adhesion molecule (L1CAM) gene, partial cds.
AY167728.1:1372-1390
GGCAGCGGTACTCGCCATCATCCTCCTCGC1372CCAGTTTCAGCAGCTGCAGGGTTTTGTTGTGGTTCTGGTAGGTGACACG
Onychomys torridus genome assembly, chromosome: 2.
LR877189.1:72957923-72957941
AGTTGACCAGGGAGTTTGAACCTCCACAAG72957923CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTGAAGCACTGAAATCCTCAG
Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:73294679-73294697
AGTTGACCAGGGAGTTTGGACCTCCACAAG73294679CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTGAAGCACTGAAACCCTCAG
Onychomys leucogaster genome assembly, chromosome: 2.
OX460372.1:63393663-63393681
TGTGTCATGTGGAGTTTGAACCTCCACAAG63393663CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTGAAGCACTGAAATCCTCAG
Peromyscus eremicus genome assembly, chromosome: 2.
OX460395.1:71877523-71877541
AGATGACCAGGAAGTCTGAACCTCCACTGG71877523CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTAAAGCACTGAAATCCTCAG
Onychomys leucogaster genome assembly, chromosome: 2.
OX460419.1:72941629-72941647
TGTGTCATGTGGAGTTTGAACCTCCACAAG72941629CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTGAAGCACTGAAACCCTCAG
Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:74806864-74806882
AGTTGACCAGGGAGTTTGAACCTCCACAAG74806864CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTGAAGCACTGAAACCCTCAG
Peromyscus eremicus genome assembly, chromosome: 2.
OX460467.1:72606089-72606107
AGATGACCAGGAAGTCTGAACCTCCACTGG72606089CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTAAAGCACTGAAATCCTCAG
Onychomys torridus genome assembly, chromosome: 2.
OX460883.1:72957923-72957941
AGTTGACCAGGGAGTTTGAACCTCCACAAG72957923CCAGTTTCAGCAGCTGCAGTCCTGTGCTCTGAAGCACTGAAATCCTCAG
Oryzias latipes strain Hd-rR chromosome 1 sequence.
CP020665.1:30283372-30283390
TAATAGTTTTTTACAAACATTCAGCATTTC30283372CCAGTTTCAGCAGCTGCAGTTTGAATTTCAAGCTGTTTTTTAAGCAGTA
Oryzias latipes strain HNI chromosome 1.
CP020779.1:28345380-28345398
ATAATTGTTTTGACAAACATTCAGCATTTC28345380CCAGTTTCAGCAGCTGCAGTTTGAATTTCAAGTTGTTTTTTAAGCAGTA
Scleropages formosus genome assembly, chromosome: 24.
LR584089.1:18479362-18479380
GGAGGCCCTGGATGAGGCAGTCCAGCTCAT18479362CCAGTTTCAGCAGCTGCAGGTCGGCCATCTGGAGACACAGGACCAGAGG
Aquila chrysaetos chrysaetos genome assembly, chromosome: 4.
LR606184.1:38080898-38080916
TAATCTGTGAAAGTGAAACTGGTACAAATA38080898CCAGTTTCAGCAGCTGCAGAGGTCAGCTCCCAGTCTTGCAATGTTCTGC
Falco punctatus genome assembly, chromosome: 4.
OY723436.1:83781020-83781038
TAAATGTAAATAGCAGGACAAGTAACATTT83781020CCAGTTTCAGCAGCTGCAGTGATTTCAGAAAGGCCTTTAGGTAAACGAA
Fringilla coelebs genome assembly, chromosome: 1.
OY740724.1:35511642-35511660
TAAGCTGCAAAAGTGGAACTGGTACCAATA35511642CCAGTTTCAGCAGCTGCAGAGTTTAGCCCCCAGTACTGCAGTGGTCAGC
Conger conger genome assembly, chromosome: 9.
OY741322.1:10162710-10162728
CCTGCTGGAGGACCTCAGGCTTCAGCAGAG10162710CCAGTTTCAGCAGCTGCAGCAACAGGCTACTAAAAAGCTGCCCGGTGAC
Larus fuscus genome assembly, chromosome: 2.
OZ010754.1:123523083-123523101
CTTTGCCTAAAATCGGAGTCTGCCTCCTTT123523083CCAGTTTCAGCAGCTGCAGGACTAGGATTTTGGCAACTTTGTCTCATGC
030121ABLC002069HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC002069, mRNA sequence.
CN908369.1:105-123
TCTCTCTCTCTCTCTCTCCAAAAAACCATG105CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
010702AVBC007248HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC007248, mRNA sequence.
CN940179.1:33-51
TCTCTCTCTCTCTCTCTCCAAAAAACCATG33CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
020805AVBC012065HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC012065, mRNA sequence.
CN947918.1:32-50
TCTCTCTCTCTCTCTCTCCAAAAAACCATG32CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
020808AVBC013524HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC013524, mRNA sequence.
CN948701.1:32-50
TCTCTCTCTCTCTCTCTCCAAAAAACCATG32CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
020808AVBC013590HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC013590, mRNA sequence.
CN948743.1:32-50
TCTCTCTCTCTCTCTCTCCAAAAAACCATG32CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
011022ABEA003898HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA003898, mRNA sequence.
EB148437.1:45-63
TCTCTCTCTCTCTCTCTCCAAAAAACCATG45CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
011023ABEA002302HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA002302, mRNA sequence.
EB148760.1:45-63
TCTCTCTCTCTCTCTCTCCAAAAAACCATG45CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
011027ABEA005386HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA005386, mRNA sequence.
EB149754.1:45-63
TCTCTCTCTCTCTCTCTCCAAAAAACCATG45CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
TSA: Lingulodinium polyedrum Locus_39861_Transcript_1/1.Lipo mRNA sequence.
JO729794.1:65-83
AAAGGTCCAGCACCGTGGCGGGGCTAACCT65CCAGTTTCAGCAGCTGCAGGGCGCCAGGCGGCAGCCCCTCCGCAAGGCT
TSA: Pyrus x bretschneideri Unigene63194_XinShao mRNA sequence.
JR650861.1:56-74
TCTCTCTCTCGCTCTCTCCAAAAAACCATG56CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
Pongo abelii chromosome UNKNOWN clone CH276-264N4, WORKING DRAFT SEQUENCE, 6 unordered pieces.
AC200569.2:117929-117947
GGCAGCGGTACTCGCCATCATCCTCCTCGC117929CCAGTTTCAGCAGCTGCAGGGTTTTGTTGTGGTTCTGGTAGGTGACACG
Cenchrus purpureus cultivar elephant grass chromosome B1.
CP053461.1:155653163-155653181
GTTGGGAAAATTTTTGGGAACTAAACAGGA155653163CCAGTTTCAGCAGCTGCAGGAGCACTGCATACAACCTCGCAAGGCCTAG
Tetradesmus obliquus strain DOE0152z chromosome 11a.
CP126201.1:1357119-1357137
GTTGCTGATGGTGCTGCTAAGCCAGCTGTG1357119CCAGTTTCAGCAGCTGCAGGAGCAGCCGGTGCTGCTGGCTGATCTGTTA
Tetradesmus obliquus strain DOE0152z chromosome 11b.
CP126218.1:1371909-1371927
GTTGCTGATGGTGCTGCTAAGCCAGCTGTG1371909CCAGTTTCAGCAGCTGCAGGAGCAGCCGGTGCTGCTGGCTGATCTGTTA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:6478390-6478408
TCTCTCTCTCTCTCTCTCCAAAAAACCATG6478390CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:6714022-6714040
TCTCTCTCTCTCTCTCTCCAAAAAACCATG6714022CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:6134775-6134793
TCTCTCTCTCTCTCTCTCCAAAAAACCATG6134775CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCCTCTA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:6629988-6630006
TCTCTCTCTCTCTCTCTCCAAAAAACCATG6629988CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
Theobroma grandiflorum isolate C1074 chromosome 10.
CP142135.1:25267330-25267348
TTTGCATGCAGAGAACAGGAATCTTGAGCT25267330CCAGTTTCAGCAGCTGCAGGAATCACATAGGAACTTAGAAAGCACTATA
Vicia faba genome assembly, chromosome: 1S.
OX451735.1:287537061-287537079
ACCCCCTTTCAGCATTTCGAGGAGGTACAT287537061CCAGTTTCAGCAGCTGCAGAGACAACAGTTGAAGAGAATGTCTCCTTAA
Vicia faba genome assembly, chromosome: 1S.
OX451735.1:482588473-482588491
ACCCCCTTTCAGCATTTCGAGGAGGTACAT482588473CCAGTTTCAGCAGCTGCAGAGACAACAGGTGAAGAGAATGTTTCCTTGA
Vicia faba genome assembly, chromosome: 1S.
OX451735.1:1499439678-1499439696
ACCCCCTTCCAGCATTTCGAGGAGGTACAT1499439678CCAGTTTCAGCAGCTGCAGAGACAATAACCGAAGAGAATGATTCCTTGA
Vicia faba genome assembly, chromosome: 2.
OX451737.1:1195532619-1195532637
ACCCCCTTCCAGCATTTCGAGGAGGTACAT1195532619CCAGTTTCAGCAGCTGCAGAGACAATGACCGAAGATAATGATTCCTTGA
Vicia faba genome assembly, chromosome: 3.
OX451738.1:29516818-29516836
ACCCCCTTCCAGCATTTCGAAGAGGTGCAT29516818CCAGTTTCAGCAGCTGCAGAGACAATGGCCGAAGAGAAGGATTCCTTGA
Vicia faba genome assembly, chromosome: 3.
OX451738.1:1135775235-1135775253
ACCCCCTTTCAGCATTTCGAGGAGGTACAT1135775235CCAGTTTCAGCAGCTGCAGAGACAACAGTTGAAGAGAACGTTTCCTTAA
Vicia faba genome assembly, chromosome: 3.
OX451738.1:1135789561-1135789579
ACCCCCTTTCAGCATTTCGAGGAGGTACAT1135789561CCAGTTTCAGCAGCTGCAGAGACAACAGTTGAAGAGAACGTTTCCTTAA
Vicia faba genome assembly, chromosome: 4.
OX451739.1:196278768-196278786
ACCCCCTTTCAGCATTTCGAGGAGGTGCAT196278768CCAGTTTCAGCAGCTGCAGAGACAACAGTCAAAGAGAATGATTCCTTGA
Vicia faba genome assembly, chromosome: 4.
OX451739.1:343593405-343593423
ACCCCCTTTCAGCATTTCGAGGAGGTGCAT343593405CCAGTTTCAGCAGCTGCAGAGACAATGGCCGAAGAGAATGATTCCTTGA
Vicia faba genome assembly, chromosome: 5.
OX451740.1:534702489-534702507
ACCCCCTTCCAACATTTCGAGGAGGTACAT534702489CCAGTTTCAGCAGCTGCAGAGACAATGGCCGAAGAGAATGATTCCTTGA
Theobroma cacao genome assembly, chromosome: 10.
OY284447.1:20469276-20469294
TTTGCATGCAGAGAACAGGAATCTTGAGCT20469276CCAGTTTCAGCAGCTGCAGGAATCACATAAAAACTTGGAAAGCACTATT
Agrostemma githago genome assembly, chromosome: 4.
OY288242.1:25612103-25612121
ATCAAAGATTGGAACTTTTACCAAAATTTG25612103CCAGTTTCAGCAGCTGCAGCTAGTTGAAATTGTGTTCTGATGATGCTTT
Agrostemma githago genome assembly, chromosome: 10.
OY288248.1:62483245-62483263
ATCAAAGATTGGAACTTTCACCAAAATTTG62483245CCAGTTTCAGCAGCTGCAGCTAGTTGAAATTGTGTTCTGATGATGCTTT
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:6420144-6420162
TCTCTCTCTCTCTCTCTCCAAAAGACCATG6420144CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
Ligustrum vulgare genome assembly, chromosome: 7.
OY743174.1:28060725-28060743
TATCTCCTTCCTGTTTGTGTGTATATATCC28060725CCAGTTTCAGCAGCTGCAGCATCACGTTCCAGCCCATCCAGCTTTCCAG
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5228530-5228548
TCTCTCTCTCGCTCTCTCCAAAAAACCATG5228530CCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTA
Pseudomonas sp. St316 DNA, complete genome.
AP021901.1:2585718-2585736
ATTGATAGTCGCCGGCCTGCGGCGTACGGC2585718CCAGTTTCAGCAGCTGCAGGGGCGGCATCTGGCGTTGATAGTGCCAACT
Streptomyces sp. NBC_00886 chromosome, complete genome.
CP108792.1:10393423-10393441
CGTCGGTGGAGTTGGCGTCCCCGCCGATCT10393423CCAGTTTCAGCAGCTGCAGGTTCGCGCCGTATCCCGGTTTGAACAGGTA
Hymenobacter canadensis strain PAMC 29467 chromosome, complete genome.
CP114767.1:3523570-3523588
GGTGCAGGACCGGCCTGGCCACTTCAGCTA3523570CCAGTTTCAGCAGCTGCAGCAGGACGTAGCGTTTCAGCTCACCGCCGCC
Hymenobacter yonginensis strain KCTC 22745 chromosome, complete genome.
CP115396.1:3988162-3988180
CGTGCAGGACCGCCCCGGCCACTTCAGCTA3988162CCAGTTTCAGCAGCTGCAGCAGGACGTGGCGTTTCAGCTGTCCGCCGCC
Trichobilharzia szidati genome assembly, chromosome: 2.
OX235272.1:89028056-89028074
TACCACTGAACTGTTGATCTGAGGCTATTT89028056CCAGTTTCAGCAGCTGCAGCTCTCACAGGCTGTTTTGAAACCCACTAAT
Hydrotaea cyrtoneurina genome assembly, chromosome: 1.
OY282512.1:103506041-103506059
GGTTCCATGGCTCTCATGGATGCCGGTGTA103506041CCAGTTTCAGCAGCTGCAGCTGGTGTTGCCATTGGCCTGATGACAAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAGTTTCAGCAGCTGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGTTTCAGCAGCTGCAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.490 | 0.482 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGTTTCAGCAGCTGCAG&k=0&no_gap=0&offset=0&limit=50
0.546 | 0.055 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCAGCTGCTGAAACTGG&k=0&no_gap=0&offset=0&limit=0
0.546 | 0.000 | cgi_end;

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