GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 04:20:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB036M17, complete sequence.
AC189325.2:61274-61294
ATATATATTAAAATTTGCTAAACTTCCACA61274CCATACCCTGAACCGAAGGTCCGAAACACATGAAAACTTCCCAGCAGTATC
Brassica napus clone BAC CZ7N2, complete sequence.
KC206509.1:165630-165650
ATATATATATAAATTTGCTAAACTTCCACA165630CCATACCCTGAACCGAAGGTCCGAAACACACGAAAACTTCCCAGCAGTATC
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:2010962-2010982
GATACTGCTGGGAAGTTTTCGTGTGTTTCG2010962GACCTTCGGTTCAGGGTATGGTGTGGAAGTTTAGCAAATCTATATATATAT
Brassica napus genome assembly, chromosome: A01.
HG994355.1:1975303-1975323
GATACTGCTGGGAAGTTTTCGTGTGTTTCG1975303GACCTTCGGTTCAGGGTATGGTGTGGAAGTTTAGCAAATTTATATATATAT
Brassica rapa genome, scaffold: A01.
LR031571.1:1965829-1965849
GATACTGCTGGGAAGTTTTCGTGTGTTTCG1965829GACCTTCGGTTCAGGGTATGGTGTGGAAGTTTAGCAAATTTATATATATAT
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:1965955-1965975
GATACTGCTGGGAAGTTTTCGTGTGTTTCG1965955GACCTTCGGTTCAGGGTATGGTGTGGAAGTTTAGCAAATTTATATATATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCATACCCTGAACCGAAGGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATACCCTGAACCGAAGGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CCATACCCTGAACCGAAGGTC&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GACCTTCGGTTCAGGGTATGG&k=0&no_gap=0&offset=0&limit=48
0.130 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).