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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 19:44:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Eptesicus nilssonii genome assembly, chromosome: 5.
OX621284.1:1785258-1785278
ACGTTGTAGTTCCTACTCTGACCCCAGCCT1785258CCCCCAGAGAGAGAAGAGAGAGGTGGGAGCTGTGACCCAGAGTATTCCTGA
Larimichthys crocea genome assembly, chromosome: IX.
LT972198.1:12332215-12332235
GAGAGAGAGAGAGAGAGAGAGAGAGACCCC12332215CCCCCAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
Silurus aristotelis genome assembly, chromosome: 2.
OX327754.1:19866391-19866411
TGAGAATATTACACACCTGAGCACACAGGC19866391CCCCCAGAGAGAGAAGAGAGAGAGAGAGAGAAACACACTCGGAGGGACAGG
Blennius ocellaris genome assembly, chromosome: 24.
OY730224.1:4147275-4147295
CACAGTTACTACAGAATGACTCATATTTTA4147275CCCCCAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCTTAT
Conger conger genome assembly, chromosome: 2.
OY741315.1:69903597-69903617
GAGAGGGAGAGAGAAGAGAGAGAGCTGGAT69903597CCCCCAGAGAGAGAAGAGAGAGAGGAGAGAGTCTCACCTCTGCAGAATCAT
Thunnus thynnus genome assembly, chromosome: 11.
OZ004742.1:4794234-4794254
GCCGAGAGCGGAGCAAGTCTCCCACACAGA4794234CCCCCAGAGAGAGAAGAGAGAAGATCACATCAGCTTCAGCTGCAGGTTATC
PT11-C2-301-049-D03-CT.F Poncirus trifoliata bark, infected with Phytophthora parasitica Citrus trifoliata cDNA, mRNA sequence.
EY836360.1:870-890
GCAACGCGAAGACAAGACGGCAACCACGAC870CCCCCAGAGAGAGAAGAGAGACACACGCCCATCAACACAACACAACAGATC
Papaver somniferum cultivar Roxanne chromosome 6.
CP048218.1:33603549-33603569
AAAACAGAAGGGAAATGGTATAAAAAATAA33603549CCCCCAGAGAGAGAAGAGAGAAGAGAAAAAAATTAATGAGTACATCGACAA
Macrobrachium nipponense isolate FS-2020 chromosome 6.
CP062044.1:18868460-18868480
GTCTTTTGTAATGATACATATGGGCACATT18868460CCCCCAGAGAGAGAAGAGAGAGAGAAGAGAGAGAGAGAGAGAGATTTTGTG
Patella depressa genome assembly, chromosome: 7.
OX419721.1:51998325-51998345
CGGCACTCTAGACCACTAGGCCATCCCAAC51998325CCCCCAGAGAGAGAAGAGAGACACAAGACACAGATTGAGATATTACAAATT
Mythimna pallens genome assembly, chromosome: 29.
OY540853.1:9293530-9293550
TAAATCCTACGGACGCGAGCAACTTCTACC9293530CCCCCAGAGAGAGAAGAGAGAACGGAGATATGGCGAGCCAAGTTGGAGGCC
Coregonus sp. 'balchen' genome assembly, chromosome: 21.
LR778273.1:43390271-43390291
TGGGTTCTCTCTCTTCCCCTATCTGGGGTC43390271TCTCTCTTCTCTCTCTGGGGGTCTTGCTTCTCTCTCTCTCTGGGTCTCATC
Larimichthys crocea genome assembly, chromosome: II.
LT972186.1:1068399-1068419
CCATGAAATTAAACACACCTCTCTGACTCG1068399TCTCTCTTCTCTCTCTGGGGGGGGTCTCTTTCATTCATCCAACATCCCCCT
Tuber melanosporum mRNA 5-prime sequence from clone SY0AAA60YN19 (SY0AAA60YN19FM1).
FP402914.1:660-680
GAGGTCTTTTTCCTTTCATTCTTTCCTGCT660TCTCTCTTCTCTCTCTGGGGGTTCTTCTGCTTCCTACTGGACCATAGGTTT
Tuber melanosporum mRNA 5-prime sequence from clone SY0AAD21YN24 (SY0AAD21YN24FM1).
FP471457.1:232-252
GAGGTCTTTTTCCTTTCATTCTTTCCTGCT232TCTCTCTTCTCTCTCTGGGGGTTCTTCTGCTTCCTACTGTACCATAGGTTT
Trifolium repens mRNA, clone: WCC18m09_039, unspecified EST.
FY460515.1:137-157
AACTGAAAAGTCATCCATCCCTTCTCTTTC137TCTCTCTTCTCTCTCTGGGGGTTTATTTATTTATTTATTTATTACTTTTTT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:59039673-59039693
AACTGAAAAGTCATCCATCCCTTCTCTTTC59039673TCTCTCTTCTCTCTCTGGGGGTTTATTTATTTATTTATTACTTTTTTGCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCCAGAGAGAGAAGAGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCAGAGAGAGAAGAGAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.171 | 0.163 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCCAGAGAGAGAAGAGAGA&k=0&no_gap=0&offset=0&limit=50
0.455 | 0.284 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCTCTTCTCTCTCTGGGGG&k=0&no_gap=0&offset=0&limit=39
0.459 | 0.004 | cgi_end;

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