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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 07:35:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Triticum aestivum genome assembly, chromosome: 7A.
LR862526.1:407706377-407706396
TGGTGGTTATGCGATTGATATCGTGGAAGC407706377CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR862547.1:403055964-403055983
TGGTGGTTATGCGATTGATATCGTGGAAGC403055964CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR862568.1:417758785-417758804
TGGTGGTTATGCGATTGATATCGTGGAAGC417758785CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR865476.1:402870324-402870343
TGGTGGTTATGTGATTGATATCGTGGAAGC402870324CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR865497.1:407402177-407402196
TGGTGGTTATGCGATTGATATCGTGGAAGC407402177CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR865518.1:408282948-408282967
TGGTGGTTATGCGATTGATATCGTGGAAGC408282948CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR865757.1:407643290-407643309
TGGTGGTTATGCGATTGATATCGTGGAAGC407643290CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR865778.1:403909047-403909066
TGGTGGTTATGCGATTGATATCGTGGAAGC403909047CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR877327.1:404412994-404413013
TGGTGGTTATGCGATTGATATCGTGGAAGC404412994CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LR878453.1:401922290-401922309
TGGTGGTTATGCGATTGATATCGTGGAAGC401922290CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
LS992098.1:403012517-403012536
TGGTGGTTATGCGATTGATATCGTGGAAGC403012517CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum turgidum subsp. durum genome assembly, chromosome: 7A.
LT934123.1:398568725-398568744
TGGTGGTTATGTGATTGATATCGTGGAAGC398568725CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
OU015739.1:417584554-417584573
TGGTGGTTATGCGATTGATATCGTGGAAGC417584554CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
OU343175.1:414830680-414830699
TGGTGGTTATGCGATTGATATCGTGGAAGC414830680CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
OU963890.1:409096527-409096546
TGGTGGTTATGCGATTGATATCGTGGAAGC409096527CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
OV100755.1:407025645-407025664
TGGTGGTTATGCGATTGATATCGTGGAAGC407025645CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
OW530328.1:407025645-407025664
TGGTGGTTATGCGATTGATATCGTGGAAGC407025645CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Triticum aestivum genome assembly, chromosome: 7A.
OX637243.1:331139273-331139292
TGGTGGTTATGCGATTGATATCGTGGAAGC331139273CCTCGGGAAAGATGCCAAAGTGTCAAAACTTTGATGGAGTCAAATGGTGA
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4134392-4134411
GAACTAATCTTATGCAACTAATTGAGTAAT4134392CCTCGGGAAAGATGCCAAAGTATAATACACACGATTTGAGGTAGATGGTG
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4144502-4144521
AAACTAGTCTTATGCAACTAATTGAGTAGT4144502CCTCGGGAAAGATGCCAAAGTATAAGACACATGATTTGAGGTGATTCGGT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4221803-4221822
GAACTAATCTTATGCAACTAACTGAGTAAT4221803CCTCGGGAAAGATGCCAAAGTATAATACACACGATTTGAGGTAATACGGT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4282598-4282617
GAACTAACCTTATGCAACTAATTGAGTAGT4282598CCTCGGGAAAGATGCCAAAGTATAAGACACAATTTGAGGTGATACGGAAG
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4304559-4304578
GAATTAATCTCCCCCAACTAATTGAGTAAT4304559CCTCGGGAAAGATGCCAAAGTATAATACACACGATTTGAGGTAATACGGT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4347727-4347746
TAATTAATCTCTCGCAATTAATTGAGTAAT4347727CCTCGGGAAAGATGCCAAAGTATAATACACACGATTTGAGGTAATACGGT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4377632-4377651
GAACTAATCTTATGCAATTAACTGAGTCAT4377632CCTCGGGAAAGATGCCAAAGTATAATACACACGATTTGAGGTAATACGGT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:4306006-4306025
GAACTAATCTGTTGCAACTAACTGAGTAAT4306006CCTCGGGAAAGATGCCAAAGTATAATACACATGATTTGAGGTAATACGGT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:4314497-4314516
GAATTAATCTGTTGCGACTAACTGAGTAAT4314497CCTCGGGAAAGATGCCAAAGTATAATACACACGATTTGAGGTAATACGGT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:4319152-4319171
GAACTAGTCTTATGCAACTAATTGAGTAGT4319152CCTCGGGAAAGATGCCAAAGTATAAGACACATGATTTGAGGTGATATGGT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:4323330-4323349
GAACTAACCTTATGCAACTTATTGAGTAGT4323330CCTCGGGAAAGATGCCAAAGTATAAGACACACAATTTGAGGTGATACGGA
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3313680-3313699
ATTCGCATCATATGCAACTAACTGAGTAAT3313680CCTCGGGAAAGATGCCAAAGTATAATACACACAATTTGAGGTAATACGGT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3319401-3319420
GAACTAGTCTTATGCAACTAATTGAGTAGT3319401CCTCGGGAAAGATGCCAAAGTACAAGACACAGGATTTGAGGTGATGCGGT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3323506-3323525
GAACTAATCTTATGCAACTAATTGAGTAAT3323506CCTCGGGAAAGATGCCAAAGTATAAGACACACGATTTTAGGTAATACGGT
000530AEPA003853HT (AEPA) Pinkie expanding leaf Malus domestica cDNA clone AEPA003853, mRNA sequence.
EB111342.1:225-244
ACCGTATTACCTCAAATCGTGTGTGTTATA225CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
TSA: Pyrus x bretschneideri Unigene83_XinShao mRNA sequence.
JR595509.1:342-361
ACCGTATTACCTCAAATCGTGCGTGTTATA342CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40138757-40138776
ACCGTATTACCTCAAATCGTGTGTGTTGTA40138757CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40158427-40158446
ACCGTATCACCTCAAATCACGTGTCTTATA40158427CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATGAGACTAGCTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40174128-40174147
ACCGTATTACCTCAAATCGTGTGTATTATA40174128CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40185217-40185236
ACCGTATTACCTCAAATCGTGTGTATTATA40185217CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTCGGGGGAGATTAATTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29590262-29590281
ACCGTATCACCTCAAATCATGTGTCTTATA29590262CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGACTAGCTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29621857-29621876
ACCGTATTACCTCAAATCGTGTGTATTATA29621857CTTTGGCATCTTTCCCGAGGATTACTCAGTTAATTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29627345-29627364
ACCGTATCACCTCAAATCATGTGTCTTATA29627345CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGACTAGCTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29648363-29648382
GCCGTATTACCTCAAATCGTGTGTATTATA29648363CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29666433-29666452
ACCGTATTACCTCAAATCGTGTGTATTATA29666433CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTCGCGGGAGATTAATTT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29678701-29678720
ACCGTATTACCTCAAATCGTGTGTATTATA29678701CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27957223-27957242
ACCGTATTACCTCAAATCGTGTGTGTTGTA27957223CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29581278-29581297
ACCGTATTACCTCAAATCGTGTGTATTATA29581278CTTTGGCATCTTTCCCGAGGATTACTCAGTTAATTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29624774-29624793
ACCGTATTACCTCAAATCGTGTGTATTATA29624774CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTCGGGGGAGATTAATTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29654563-29654582
ACCGAATCACCTCAAATCATGTGTCTTATA29654563CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGACTAGTTC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29659455-29659474
ACCGTATTACCTCAAATCGTGTGTATTATA29659455CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29235359-29235378
ACCGTATCACCTCAAATCATGTGTCTTATA29235359CTTTGGCATCTTTCCCGAGGACCACTCAATTAGTTGCGTGAGACTAGCTC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29250486-29250505
GCCGTATTACCTCAAATCGTGTGTATTATA29250486CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29268535-29268554
ACCGTATCACCTCAAATCATGTGTCTTATA29268535CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGACTAGCTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25948953-25948972
ACCGTATCACCTCAAATCATGTGTCTTATA25948953CTTTGGCATCTTTCCCGAGGACCACTCAATTAGTTGCGTGAGACTAGCTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25964108-25964127
GCCGTATTACCTCAAATCGTGTGTATTATA25964108CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25977885-25977904
ACCGTATCACCTCAAATCATGTGTCTTATA25977885CTTTGGCATCTTTCCCGAGGACCACTCAATTAGTTGCGTGAGACTAGCTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:26008351-26008370
CTTCCGTATCACCTCAAATTGTGTCTTATA26008351CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGGTTAGTTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:26073091-26073110
ACCGTATTACCTCAAATCGTGTGTATTATA26073091CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTTGCATAAGATTAGTTC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:26154573-26154592
ACCGTATTACCTCAAATCGTGTGTATTATA26154573CTTTGGCATCTTTCCCGAGGATTACTCGGTTAGTTGCATAAGATTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:25983348-25983367
ACCGTATCACCTCAAATCATGTGTCTTATA25983348CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGACTAGCTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26001835-26001854
ACCGTATTACCTCAAATCGTGTGTGTTGTA26001835CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26004416-26004435
ACCGTATCACCTCAAATCATCTGTCTTGTA26004416CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGATTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26029234-26029253
ACCGTATTACCTCAAATCGTGTATGTTATA26029234CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTTGTCAGAGATTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26056336-26056355
ACCGTATTACCTCAAATCGTGTGTATTATA26056336CTTTGGCATCTTTCCCGAGGATCACTCAGTTAGTTGCATAAGATTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26068804-26068823
ACCGTATCACCTCAAATCATGTGTCTTATA26068804CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGACTAGCTC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26136706-26136725
TCCGTATCACCTCAAATTGTGTGTCATATA26136706CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGGTTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29754534-29754553
ACCGTATCACCTCAAATCATGTGTCTTATA29754534CTTTGGCATCTTTCCCGAGGACCACTCAATTAGTTGCGTGAGACTAGCTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29769689-29769708
GCCGTATTACCTCAAATCGTGTGTATTATA29769689CTTTGGCATCTTTCCCGAGGATTACTCAGTTAGTTGCATAAGATTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29783466-29783485
ACCGTATCACCTCAAATCATGTGTCTTATA29783466CTTTGGCATCTTTCCCGAGGACCACTCAATTAGTTGCGTGAGACTAGCTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29813932-29813951
CTTCCGTATCACCTCAAATTGTGTCTTATA29813932CTTTGGCATCTTTCCCGAGGACTACTCAATTAGTTGCATAAGGTTAGTTC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29878672-29878691
ACCGTATTACCTCAAATCGTGTGTATTATA29878672CTTTGGCATCTTTCCCGAGGATTACTCAATTAGTTGCATAAGATTAGTTC
Marinithermus hydrothermalis DSM 14884, complete genome.
CP002630.1:408170-408189
TGCGATTCGGGCGTTACGAGAGGGGTTGGC408170CTTTGGCATCTTTCCCGAGGGGGCGCGGACGCGCACGGGACGCTTGCAAC
Meiothermus taiwanensis WR-220 chromosome, complete genome.
CP021130.1:131693-131712
CGCCATCCGCGTGCTCAAAAACGGCATGGC131693CTTTGGCATCTTTCCCGAGGGACGGCGCAGCCGCACCGGCTTTATCGAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCGGGAAAGATGCCAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCGGGAAAGATGCCAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCGGGAAAGATGCCAAAG&k=0&no_gap=0&offset=0&limit=50
0.214 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTGGCATCTTTCCCGAGG&k=0&no_gap=0&offset=0&limit=18
0.239 | 0.025 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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