GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 08:42:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:236972155-236972177
GGGAGGAAATGTGGGGGATGAAACTGAAAT236972155CTACAATGGAAGGGGAGAGTTACCACTACCATCCTTACTACACTTGCTGAAAC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:241489914-241489936
GGGAGGAAATGTGGGGGATGAAACTGAAAT241489914CTACAATGGAAGGGGAGAGTTACCACTACCATCCTTACTACACTTGCTGAAAC
KS19063C04 KS19 Capsicum annuum cDNA, mRNA sequence.
GD093112.1:326-348
GTTTCAGCAAGTGTAGTAAGGATGGTAGTG326GTAACTCTCCCCTTCCATTGTAGATTTCAGTTTCATCCCCCACATTTCCTCCC
TSA: Capsicum annuum MGMT_Contig2292, mRNA sequence.
JW052536.1:1872-1894
GTTTCAGCAAGTGTAGTAAGGATGGTAGTG1872GTAACTCTCCCCTTCCATTGTAGATTTCAGTTTCATCCCCCACATTTCCTCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTACAATGGAAGGGGAGAGTTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTACAATGGAAGGGGAGAGTTAC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.088 | 0.080 | search_plus_done; http://172.18.8.135:50400/match?q=CTACAATGGAAGGGGAGAGTTAC&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=GTAACTCTCCCCTTCCATTGTAG&k=0&no_gap=0&offset=0&limit=48
0.199 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).