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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-08 07:14:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KR 1020110025451-A/3: A Method for Identifying Barley Varieties using Molecular Markers.
DI185920.1:1-20
1CTAGCAACTTCCCAACCGAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR722618.1:332533899-332533918
GTATCACACCGCCCAAGTGAACATTGACAT332533899CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR812263.1:346025020-346025039
GTATCACACTGCCCAAGTGAACATTGACAT346025020CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR812972.1:332533899-332533918
GTATCACACCGCCCAAGTGAACATTGACAT332533899CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR824634.1:335734974-335734993
GTATCACACTGCCCAAGTGAACATTGACAT335734974CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828089.1:328759339-328759358
GTATCACACCGCCCAAGTGAACATTGACAT328759339CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828096.1:325914774-325914793
GTATCACACTGCCCAAGTGAACATTGACAT325914774CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828110.1:319533331-319533350
GTATCACACTGCCCAAGTGAACATTGACAT319533331CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828134.1:346493478-346493497
GTATCACACTGCCCAAGTGAACATTGACAT346493478CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828134.1:346494152-346494171
GTATCACACTGCCCAAGTGAACATTGACAT346494152CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828148.2:336300705-336300724
GTATCACACTGCCCAAGTGAACATTGACAT336300705CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828162.1:343861563-343861582
GTATCACACCGCCCAAGTGAACATTGACAT343861563CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828169.1:331881396-331881415
GTATCACACCGCCCAAGTGAACATTGACAT331881396CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828183.1:331678528-331678547
GTATCACACTGCCCAAGTGAACATTGACAT331678528CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828190.1:334550199-334550218
GTATCACACTGCCCAAGTGAACATTGACAT334550199CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR865397.1:320154667-320154686
GTATCACACCGCCCAAGTGAACATTGACAT320154667CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR890098.1:330211442-330211461
GTATCACACCGCCCAAGTGAACATTGACAT330211442CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OU015683.1:339094048-339094067
GTATCACACCGCCCAAGTGAACATTGACAT339094048CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX459911.1:331411274-331411293
GTATCACACCGCCCAAGTGAACATTGACAT331411274CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX459932.1:333276012-333276031
GTATCACACTGCCCAAGTGAACATTGACAT333276012CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459972.1:330694245-330694264
GTATCACACCGCCCAAGTGAACATTGACAT330694245CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX459979.1:331075290-331075309
GTATCACACTGCCCAAGTGAACATTGACAT331075290CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460007.1:336241226-336241245
GTATCACACTGCCCAAGTGAACATTGACAT336241226CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460014.1:335469194-335469213
GTATCACACTGCCCAAGTGAACATTGACAT335469194CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460021.1:331138626-331138645
GTATCACACTGCCCAAGTGAACATTGACAT331138626CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460062.1:330292264-330292283
GTATCACACCGCCCAAGTGAACATTGACAT330292264CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460070.1:334242317-334242336
GTATCACACTGCCCAAGTGAACATTGACAT334242317CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460097.1:331831539-331831558
GTATCACACTGCCCAAGTGAACATTGACAT331831539CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460112.1:331962401-331962420
GTATCACACCGCCCAAGTGAACATTGACAT331962401CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460119.1:333775713-333775732
GTATCACACTGCCCAAGTGAACATTGACAT333775713CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460126.1:333757987-333758006
GTATCACACCGCCCAAGTGAACATTGACAT333757987CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460140.1:332369843-332369862
GTATCACACTGCCCAAGTGAACATTGACAT332369843CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460147.1:329652408-329652427
GTATCACACCGCCCAAGTGAACATTGACAT329652408CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460154.1:330873074-330873093
GTATCACACCGCCCAAGTGAACATTGACAT330873074CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460196.1:331342342-331342361
GTATCACACTGCCCAAGTGAACATTGACAT331342342CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460203.1:333531354-333531373
GTATCACACTGCCCAAGTGAACATTGACAT333531354CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460224.1:330799868-330799887
GTATCACACCGCCCAAGTGAACATTGACAT330799868CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460238.1:333151018-333151037
GTATCACACCGCCCAAGTGAACATTGACAT333151018CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460245.1:332259043-332259062
GTATCACACCGCCCAAGTGAACATTGACAT332259043CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460266.1:334452282-334452301
GTATCACACCGCCCAAGTGAACATTGACAT334452282CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460273.1:332259958-332259977
GTATCACACTGCCCAAGTGAACATTGACAT332259958CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460280.1:329471850-329471869
GTATCACACCGCCCAAGTGAACATTGACAT329471850CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460287.1:331340993-331341012
GTATCACACCGCCCAAGTGAACATTGACAT331340993CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460294.1:332934050-332934069
GTATCACACCGCCCAAGTGAACATTGACAT332934050CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460301.1:335080319-335080338
GTATCACACTGCCCAAGTGAACATTGACAT335080319CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 3H.
OX590757.1:326958044-326958063
GTATCACACTGCCCAAGTGAACATTGACAT326958044CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX638655.1:335273526-335273545
GTATCACACTGCCCAAGTGAACATTGACAT335273526CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX638751.1:332902034-332902053
GTATCACACTGCCCAAGTGAACATTGACAT332902034CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare genome assembly, chromosome: 3H.
OX638758.1:331458165-331458184
GTATCACACCGCCCAAGTGAACATTGACAT331458165CTAGCAACTTCCCAACCGACCACGCACACACAAGCATTGGTTCACACACA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
HG994376.1:308794012-308794031
TGTGTGTGAACCAATGCTTGTGTGTGCGTG308794012GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828103.2:343050523-343050542
TGTGTGTGAACCAATGCTTGTGTGTGCGTG343050523GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OU015703.1:345374151-345374170
TGTGTGTGAACCAATGCTTGTGTGTGCGTG345374151GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OU701465.1:301918760-301918779
TGTGTGTGAACCAATGCTTGTGTGTGCGTG301918760GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX459904.1:334435910-334435929
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334435910GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460133.1:329326024-329326043
TGTGTGTGAACCAATGCTTGTGTGTGCGGG329326024GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638744.1:333929155-333929174
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333929155GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAGCAACTTCCCAACCGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAGCAACTTCCCAACCGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.125 | 0.116 | search_plus_done; http://172.18.8.135:50400/match?q=CTAGCAACTTCCCAACCGAC&k=0&no_gap=0&offset=0&limit=50
0.179 | 0.054 | search_minus_done; http://172.18.8.135:50400/match?q=GTCGGTTGGGAAGTTGCTAG&k=0&no_gap=0&offset=0&limit=1
0.183 | 0.005 | cgi_end;

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