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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-18 06:54:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gallus gallus breed Huxu chromosome 4.
CP100558.1:50084968-50084987
CAGTGAAGTCAGCTGCCTGGAATTGTTCTT50084968CTCTCTCTCTCCGTATTCTCACCAGTAGCTCTCTTTTGAGGACTTATATT
Cottoperca gobio genome assembly, chromosome: 8.
LR131938.1:6965357-6965376
CAGAGGTCCTGGCTTCATTTCCCCCGCTCC6965357CTCTCTCTCTCCGTATTCTCTTTCTGTATTCTGGCAAAGTCCGCTTTTGC
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:33562727-33562746
TCATGCTGTGCTCTCCAGCTCTGAATCTCT33562727CTCTCTCTCTCCGTATTCTCCATCTCTGCACCCTCTCTCTCGCTGTGCTC
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:42000991-42001010
ATGCTGTGCTCTCCAGCTCTGAATCTCTCT42000991CTCTCTCTCTCCGTATTCTCCACCTCTGCACCTCTCTCTCGCTGTGCTCT
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:42084460-42084479
CTCATGCTGTGCTCTCCAGCTCTGGCTCCT42084460CTCTCTCTCTCCGTATTCTCCACCTCTGCACCTCTCTCTCCCTGTCAATG
Rhinatrema bivittatum genome assembly, chromosome: 3.
LR584389.1:453104018-453104037
CTGCTCTGACAGTTGCACCCACATCCCTGC453104018CTCTCTCTCTCCGTATTCTCTGGGCTGTGTCATCTGCTGCTACAAACCTT
Chanos chanos genome assembly, chromosome: 6.
LR697111.1:6426006-6426025
CCTCCTCTCTCTGTCTCTCTGCCTCTGTCT6426006CTCTCTCTCTCCGTATTCTCTCTCTCTCTCTCACTCTCTGTATTCTCTCT
Scyliorhinus canicula genome assembly, chromosome: 9.
LR744038.1:4009792-4009811
TGGGGAACCAGCACCTTTCTCTCTCTCTCT4009792CTCTCTCTCTCCGTATTCTCTGATACTCTGTCTCTCAATGAACGCAGTTC
Larimichthys crocea genome assembly, chromosome: XIV.
LT972180.1:16578286-16578305
CTATTTTTGGACTTCATAGTGGCCATTTTC16578286CTCTCTCTCTCCGTATTCTCCGTTAGCTCAGTTAGCTCGGTCCAACATGG
Solea senegalensis genome assembly, chromosome: C.
OW185634.1:23511351-23511370
GTCCTTCCTTCCTTCCCTCTCTCTCTCTCT23511351CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: D.
OW185635.1:15975348-15975367
GTTTGTGTCCTTCCTTCCTTCCCCCTCTCT15975348CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: D.
OW185635.1:17621971-17621990
TTGTGTCCTTCCTTCCTTCCCTCTCTCTCT17621971CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: E.
OW185636.1:281316-281335
TAGTTTGTGTCCTTCCTTCCCTCTCTCTCT281316CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: G.
OW185638.1:27048651-27048670
CCTTCCTTCCTTCCCTCTCTCTCTCTCTCT27048651CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: G.
OW185638.1:27608412-27608431
GTGTCCTTCCTTCCTTCCCTCTCTCTCTCT27608412CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: K.
OW185642.1:7318715-7318734
GTTTGTGTCCTTCCTTCCTTCCCTCTCTCT7318715CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: L.
OW185643.1:26305692-26305711
TAGTTTGTGTCTTTCCTTCCTTCCCTCTCT26305692CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGCAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: O.
OW185646.1:8470071-8470090
GTGTCCTTCCTTCCTTCCCTCTCTCTCTCT8470071CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: O.
OW185646.1:8817319-8817338
TCCCTAGTTTGTGTCTTTCCTTCCTTCCCT8817319CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGCAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: O.
OW185646.1:9521399-9521418
TCCCTAGTTTGTGTCCTTCCTTCCTTCCCT9521399CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: R.
OW185649.1:296862-296881
GTTTGTGTCCTTCCTTCCTTCCCTCTCTCT296862CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: S.
OW185650.1:814225-814244
TTTGTCCAATAAGTTATAGCATATAGCTCT814225CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATTAAGATCCAGT
Solea senegalensis genome assembly, chromosome: S.
OW185650.1:1676618-1676637
TTGTGTCCTTCCTTCCTTCCCTCTCTCTCT1676618CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGCAGGATCAAGATCCAGT
Solea senegalensis genome assembly, chromosome: U.
OW185652.1:22283465-22283484
TAGTTTGTGTCCTTCCTTCCTTCCCTCTCT22283465CTCTCTCTCTCCGTATTCTCATCATGCAGGTTGAAGGATCAAGATCCAGT
Pollachius pollachius genome assembly, chromosome: 8.
OX465131.1:7703810-7703829
TCTCTATATTTCCTCTCTGTCTCGCTCTCT7703810CTCTCTCTCTCCGTATTCTCTCTGTCTGTGTGTGTGTGTGTGTGTGTGTG
Argentina silus genome assembly, chromosome: 19.
OX637386.1:903021-903040
CTTCCGCTCTCTCTCTCCCCCTCTCTCTCT903021CTCTCTCTCTCCGTATTCTCCTCTTCTGTCTGATGTTGGATATGAATTGA
Larus fuscus genome assembly, chromosome: 14.
OZ010767.1:10167849-10167868
TTGTAAAAATGAGCACGGCTCCTGCACACC10167849CTCTCTCTCTCCGTATTCTCCCATATTCACCTCTTTTCAGCCTCTTCCCA
WO 2019017406-A/6: Method for producing Hydrocarbons using Microalgae.
MA824140.1:32256-32275
ATGTGGCCCGCGAGCCTGCTGCTGACGGTT32256CTCTCTCTCTCCGTATTCTCGTCCTGTTCCATCGCGAGCGACCCGATAGC
JP 2019017305-A/6: Method for producing Hydrocarbons using Microalgae.
MA847380.1:32256-32275
ATGTGGCCCGCGAGCCTGCTGCTGACGGTT32256CTCTCTCTCTCCGTATTCTCGTCCTGTTCCATCGCGAGCGACCCGATAGC
SB_BBc285-J20.R SB_BBc Sorghum bicolor genomic 3', genomic survey sequence.
ER690837.1:10-29
GAGGGCATA10CTCTCTCTCTCCGTATTCTCTCTGCATTATATCTGTGATGTGATGCGTGG
Papaver somniferum cultivar Roxanne chromosome 7.
CP048219.1:23769400-23769419
TCTCTTTAAAGTCACTCCATCACGTTGCCT23769400CTCTCTCTCTCCGTATTCTCCGCCTCTCTCCGTATTCGGCTCCTCAAATC
Wolffia australiana isolate 7733 chromosome 13.
CP092612.1:6990727-6990746
CTCTGTATTCACACTCCCTCTCCCTTCTCT6990727CTCTCTCTCTCCGTATTCTCACTCCCTCTCCCTTCCTCTCTCCGTATTCA
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:48717390-48717409
GATTCGTTCCTTCACATTCCCTCTCTTTCT48717390CTCTCTCTCTCCGTATTCTCTCTGAAATCTTTCTCCACTACTTTAACTTG
Trifolium dubium genome assembly, chromosome: 7.
OX638068.1:246922-246941
TATCTATTTTCATTAATAGGTTTTCATTCT246922CTCTCTCTCTCCGTATTCTCTCTTATGAGTCAACAACGACAAACAATAAC
Arctium minus genome assembly, chromosome: 17.
OX941096.1:21843152-21843171
CTTTCTCTCTCTAGAACTCTCTCTCTCTCT21843152CTCTCTCTCTCCGTATTCTCCAAATCTGTTAACTCTGTTATGCGTTCTTA
Draba incana genome assembly, chromosome: 7.
OY755208.1:7571426-7571445
TATTTCCTCTATCTGCGTTTTTCTTCCTCT7571426CTCTCTCTCTCCGTATTCTCCGAATGAGATTTGCAAATCCTTCGTAACTT
Viola odorata genome assembly, chromosome: 5.
OY829541.1:26714804-26714823
ATCTGTAGGGTTTTGTCTTTTTTGGTCTCT26714804CTCTCTCTCTCCGTATTCTCGTGTTCTGCAATGTCTGAGCTAATAACAAA
Macrobrachium nipponense isolate FS-2020 chromosome 35.
CP062046.1:62138818-62138837
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT62138818CTCTCTCTCTCCGTATTCTCCTCGGTAACCTTATGTGATAAAGCAACCCC
Macrobrachium nipponense isolate FS-2020 chromosome 34.
CP062047.1:46510844-46510863
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT46510844CTCTCTCTCTCCGTATTCTCTGTCATATTGATCCCCTTCACACAAAATAA
Cordylochernes scorpioides isolate IN4F17 chromosome X.
CP092886.1:134100115-134100134
CCTCCAAGCTGAATACAATGACCTGCTTCT134100115CTCTCTCTCTCCGTATTCTCATCTCTCTCTTGTTTACAACGATGTTTATA
Angomonas deanei strain Crithidia deanei Carvalho (ATCC PRA-265) genome assembly, chromosome: 04.
LR877148.1:416952-416971
CGAAAATGTGGTATTTCCCATTCTCTCTCT416952CTCTCTCTCTCCGTATTCTCTCCCGTAGAATCATTCTTTTTCAAGATATT
4_Tbi_b3v08.
OD565922.1:1268-1287
TCCCCTTCCACCCGGCTTCCTTCCGACTCC1268CTCTCTCTCTCCGTATTCTCTTTCTTCTTTCCCCCGTCTATGATACACAT
4_Tte_b3v08.
OE001191.1:42216-42235
TCCCCTTCCACCCGGCTTCCTTCCGACTCC42216CTCTCTCTCTCCGTATTCTCTTTCTTCTTTCCCCCGTCTATGATACACAT
Ischnura elegans genome assembly, chromosome: 3.
OV121102.1:70875313-70875332
GAAACTCCCGTATCTCCTACCTACTTCCCT70875313CTCTCTCTCTCCGTATTCTCAATACAATTCCACCTCCCCCACCTCCCAAC
Tridacna crocea genome assembly, chromosome: 6.
OX031061.1:6435946-6435965
CTCCATGTTTGCATCTCTCTCTCTCTCTCT6435946CTCTCTCTCTCCGTATTCTCTCCAAATTAATGCAAGAAAAGCCAAAGTCG
Schistosoma haematobium genome assembly, chromosome: 6.
OX104050.1:22672867-22672886
GCTCACTGAAGACAATAAGTTTTTTCTTAT22672867CTCTCTCTCTCCGTATTCTCATGTGGTTTTGATATGAAAGAAAGCTTTCT
Sympetrum striolatum genome assembly, chromosome: 4.
OX388344.1:36423377-36423396
TCAATTTTCTTCCCCATGAACGGATCTCTC36423377CTCTCTCTCTCCGTATTCTCCAAATCCGTGCCGAATGTTCGGATGACGCA
Chalcis sispes genome assembly, chromosome: 3.
OX465096.1:7798438-7798457
CTTTCTCTCTCGCTCTCTCTCTCTCTCTCT7798438CTCTCTCTCTCCGTATTCTCGTAACTCTCTATTTTCCTCCCAACGGTCGT
Icerya purchasi genome assembly, chromosome: 1.
OX731680.1:496303340-496303359
CGATTTCGCGCTCTCTCTCCGTCTCTCTCT496303340CTCTCTCTCTCCGTATTCTCGGCTCTGCATACACCGAGAAGCCTCTAATG
Thysanoteuthis rhombus genome assembly, chromosome: 19.
OY735216.1:51125278-51125297
CTCTCTCTCTCTCTCTCTCTCTCTATGTCT51125278CTCTCTCTCTCCGTATTCTCTTCGTTGGATTATTTCCTCCCAACTTTTCT
Cepaea hortensis genome assembly, chromosome: 11.
OY992886.1:14298201-14298220
CTCTCTCTCTCTCTCTCTCTCTCTCTCTTT14298201CTCTCTCTCTCCGTATTCTCTTTCTCTCGTTTTCTCTTTTTCTTTTTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCTCTCTCTCCGTATTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCTCTCTCCGTATTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.349 | 0.341 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTCTCTCTCCGTATTCTC&k=0&no_gap=0&offset=0&limit=50
0.400 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAATACGGAGAGAGAGAG&k=0&no_gap=0&offset=0&limit=0
0.400 | 0.000 | cgi_end;

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