GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 09:10:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:80338841-80338860
CGCTAAAGACAAGAACCTCAAAAAAAAAAA80338841CTTAGAATGGCAGCGACAACCACAACAACATTCCTCAAACTTCAAAACCA
Chymomyza fuscimana genome assembly, chromosome: 2.
OX465089.1:30577984-30578003
CACGCACACACAGAGAGACTCGAATCCGCG30577984CTTAGAATGGCAGCGACAACAGCAACAGGTAAAACAACCACAAAGCAGAA
Lotus japonicus genomic DNA, chromosome 4, clone: LjB10P09, BM1174.
AP007867.2:24377-24396
TGGTTTTGAAGTTTGAGGAATGTTGTTGTG24377GTTGTCGCTGCCATTCTAAGTTTTTTTTTTTGAGGTTCTTGTCTTTAGCG
Sabethes cyaneus genome assembly, chromosome: 3.
OX030889.1:131232876-131232895
AAATTATCAATGGAGGTCTCATTAGTTGAC131232876GTTGTCGCTGCCATTCTAAGTCTCGTTCCCTTTCGGTCATTTCACTAAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTAGAATGGCAGCGACAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTAGAATGGCAGCGACAAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CTTAGAATGGCAGCGACAAC&k=0&no_gap=0&offset=0&limit=50
0.108 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTCGCTGCCATTCTAAG&k=0&no_gap=0&offset=0&limit=48
0.110 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).