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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 04:38:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST1079137 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWACD63 3' end, mRNA sequence.
DR689051.1:245-264
CACCACCACCGCCGCCACGGTCGCCACCAC245CTTCATTTGGCATAGTAGACAAGGATGGAGTAATGCAGGAACAATTCTTG
EST1149964 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGC45 3' end, mRNA sequence.
DT635033.1:336-355
CACCACCACCGCCGCCACGGTCGCCACCAC336CTTCATTTGGCATAGTAGACAAGGATGGAGTAATGCAGGAACAATTCTTG
TSA: Larix kaempferi PEMC11522.Lakaproemb mRNA sequence.
JR141111.1:497-516
CTCCTCCATCACCACCACCACCACCACCAC497CTTCATTTGGCATAGTAGACAAGGATGGAGTAATGCAGGATCATTTCTTG
TSA: Abies alba contig06137.Aaseedling mRNA sequence.
JV141390.1:364-383
CTCCTCCTCCGCCGCCACCACCATCACCAC364CTTCATTTGGCATAGTAGACAAGGATGGAGCAATGCGGGGCTTCGCAGTG
Brachyptera putata genome assembly, chromosome: 6.
OU015467.1:3076721-3076740
CACCAACTAATTAATCGCATCCACAAGTGA3076721CTTCATTTGGCATAGTAGACGAAACATGTAAACATTGTTATTCTAATATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCATTTGGCATAGTAGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCATTTGGCATAGTAGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.229 | 0.220 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCATTTGGCATAGTAGAC&k=0&no_gap=0&offset=0&limit=50
0.250 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GTCTACTATGCCAAATGAAG&k=0&no_gap=0&offset=0&limit=45
0.250 | 0.000 | cgi_end;

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