GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 18:17:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 1, clone: LjT03H13, TM0012a.
AP004478.1:36616-36635
CGTCTTCTGCAGCAACCATTGTCTCATCTC36616CTTCCTACGACATTCCTCTCTTCACTTCCATTTCTTCCTCTCCTCTCATC
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737469.1:296422903-296422922
TCCTCCATCACATTTCAAGGACGGCAATCC296422903CTTCCTACGACATTCCTCTCCACATGTGACAGTCATGTTGTCCATGGATC
Hordeum bulbosum genome assembly, chromosome: 3H_3.
OY737476.1:346555607-346555626
TCCTCCATCACATTTCATGGACGGCAATCC346555607CTTCCTACGACATTCCTCTCCACATGTGACAGTCATGTTGTCCATGGATC
Hordeum bulbosum genome assembly, chromosome: 3H_4.
OY737483.1:405884191-405884210
TCCTCCATCACATTTCATGGACGGCAATCC405884191CTTCCTACGACATTCCTCTCCACATGTGACAGTCATGTTGTCCATGGATC
Hordeum bulbosum genome assembly, chromosome: 3H_1.
OY737642.1:392850753-392850772
TCCTCCATCACATTTCATGGACGGCAATCC392850753CTTCCTACGACATTCCTCTCCACATGTGACAGTCATGTTGTCCATGGATC
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737875.1:408941299-408941318
TCCTCCATCACATTTCATGGACAGCAATCC408941299CTTCCTACGACATTCCTCTCCACATGTGACAGTCATGTTGTCCATGGATC
Hordeum bulbosum genome assembly, chromosome: 3H_4.
OY737889.1:405984944-405984963
TCCTCCATCACATTTCATGGACAGCAATCC405984944CTTCCTACGACATTCCTCTCCACATGTGACAGTCATGTTGTCCATGGATC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:125292217-125292236
GATGAGAGGAGAGGAAGAAATGGAAGTGAA125292217GAGAGGAATGTCGTAGGAAGGAGATGAGACAATGGTTGCTGCAGAAGACG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:125326608-125326627
GATGAGAGGAGAGGAAGAAGTGGAAGTGAA125326608GAGAGGAATGTCGTAGGAAGGAGATGGTTGCTGCAGAAGACGCCATTGTA
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737649.1:419490287-419490306
GATCCATGGACAACATGACTGTCACATGTG419490287GAGAGGAATGTCGTAGGAAGGGATTGCCGTCCATGAAATGTGATGGAGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCCTACGACATTCCTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCCTACGACATTCCTCTC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.091 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCCTACGACATTCCTCTC&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAGGAATGTCGTAGGAAG&k=0&no_gap=0&offset=0&limit=43
0.114 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).