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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 04:42:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 21.
LR877208.1:49030154-49030173
GGCCATTTTGGTGGTCTAGAATTCTAGAAG49030154CTTGTGGAGTTGCTGAACCAAGGTTATGAACCAAAAAAATGTTTTTATAG
Onychomys arenicola genome assembly, chromosome: 21.
OX460367.1:64874585-64874604
GGCCATTTTGGTGGTCTAGAATTCTAGAAG64874585CTTGTGGAGTTGCTGAACCAAGGTTATGAACCAAGAAAATGTTTTTACAG
Onychomys leucogaster genome assembly, chromosome: 21.
OX460391.1:39879929-39879948
GGCCATTTTGGTGGTCTAGAATTCTAGAAG39879929CTTGTGGAGTTGCTGAACCAAGGTTATGAACCAAAAAAAAAAAATGTTTT
Onychomys leucogaster genome assembly, chromosome: 21.
OX460438.1:40041744-40041763
GGCCATTTTGGTGGTCTAGAATTCTAGAAG40041744CTTGTGGAGTTGCTGAACCAAGGTTATGACTTTTCCAGATAGAATTAGAT
Onychomys arenicola genome assembly, chromosome: 21.
OX460462.1:60445814-60445833
GGCCATTTTGGTGGTCTAGAATTCTAGAAG60445814CTTGTGGAGTTGCTGAACCAAGGTTATGAACCAAGAAAATGTTTTTACAG
Onychomys torridus genome assembly, chromosome: 21.
OX460902.1:49030154-49030173
GGCCATTTTGGTGGTCTAGAATTCTAGAAG49030154CTTGTGGAGTTGCTGAACCAAGGTTATGAACCAAAAAAATGTTTTTATAG
Orcinus orca genome assembly, chromosome: 4.
OW443363.1:24877123-24877142
ACTGAAGAGAAGCCTCCCCAGAGGTCTGGA24877123CTTGTGGAGTTGCTGAACCAATCCTGGAGTCACCTACCTCGTCACTTGTC
Lagenorhynchus albirostris genome assembly, chromosome: 4.
OX459075.1:23541335-23541354
ACTGAAGAGAAGCCTCCCCAGAGGTCTGGA23541335CTTGTGGAGTTGCTGAACCAATCCTGGAGTCACCTACCTCGTCACTTGTC
Delphinus delphis genome assembly, chromosome: 5.
OX465330.1:23211563-23211582
ACTGAAGAGAAGCCTCCCCAGAGGTCTGGA23211563CTTGTGGAGTTGCTGAACCAATCCTGGAGTCACCTACCTCGTCACTTGTC
Balaenoptera acutorostrata genome assembly, chromosome: 5.
OX465354.1:26074022-26074041
ACTGAAGAGAAGCCTCCCCAGAGGTCTGGA26074022CTTGTGGAGTTGCTGAACCAATCCTGCAGTCACCTACCTCGTCACTTGTC
Papaver somniferum cultivar Roxanne chromosome 3.
CP048215.1:256096970-256096989
ATACATGAGATTTTACAACTAAAGATAAGA256096970CTTGTGGAGTTGCTGAACCATATAATTCCAATATATGCATATTGATGAAC
Fraxinus pennsylvanica genome assembly, chromosome: 22.
OU503057.1:25576418-25576437
AAGGGTTTGGGTTTTCAATCCATCAGCTCT25576418CTTGTGGAGTTGCTGAACCATTGTAATCTGTGACTCTATTGTCCTTTTGT
Stenella coeruleoalba genome assembly, chromosome: 4.
OX596388.1:127398635-127398654
GACAAGTGACGAGGTAGGTGACTCCAGGAT127398635TGGTTCAGCAACTCCACAAGTCCAGACCTCTGGGGAGGCTTCTCTTCAGT
Globicephala melas genome assembly, chromosome: 5.
OY734043.1:116859626-116859645
GACAAGTGACGAGGTAGGTGACTCCAGGAT116859626TGGTTCAGCAACTCCACAAGTCCAGACCTCTGGGGAGGCTTCTCTTCAGT
Salarias fasciatus genome assembly, chromosome: 17.
LR597452.1:11879967-11879986
AAATCACATTGTTTTGCTAAATTTTCTTCC11879967TGGTTCAGCAACTCCACAAGTTAAACCACCAAACAAAAGACAATGACGAA
TSA: Punica granatum pom_peel_seq_9853.contig1 mRNA sequence.
JI990785.1:37-56
AGGGACCCTGACTAGAGTCGATCAGCAAGT37TGGTTCAGCAACTCCACAAGCTTATAGATATGTATGAGGTTCAGGACTTC
Papaver somniferum cultivar Roxanne chromosome 7.
CP048219.1:73705202-73705221
GTTCATCAATATGCATATATTGGAATTATA73705202TGGTTCAGCAACTCCACAAGTCTTATCTTTAGTTATAAAATCTTATGTAT
Coriaria nepalensis isolate Cnep1 chromosome 03.
CP114463.1:2981404-2981423
TTCCTGGAACTAACGAATCCATTGAAAAGT2981404TGGTTCAGCAACTCCACAAGTTGATAGATCTTCACGAGGTGAGGGTGCTG
Coriaria nepalensis isolate Cnep1 chromosome 03.
CP114483.1:2979292-2979311
TTCCTGGAACTAACGAATCCATTGAAAAGT2979292TGGTTCAGCAACTCCACAAGTTGATAGATCTTCACGAGGTGAGGGTGCTG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:37970236-37970255
TTCCCGGTACAGATGATTCAATATCCAAGT37970236TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:38915490-38915509
TTCCCGGTACAGATGATTCAATATCCAAGT38915490TGGTTCAGCAACTCCACAAGTTGATAGATGTTCATGAGGTGAGGGTTACA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:36424143-36424162
TTCCCGGTACAGATGATTCAATATCCAAGT36424143TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:36958077-36958096
TTCCCGGTACAGATGATTCAATATCCAAGT36958077TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:39302478-39302497
TTCCCGGTACAGACGATTCAATATCCAAGT39302478TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:35388619-35388638
TTCCCGGTACAGATGATTCAATATCCAAGT35388619TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Fraxinus pennsylvanica genome assembly, chromosome: 9.
OU503044.1:20214412-20214431
ACAAAAGGACAATAGAGTCACAGATTACAA20214412TGGTTCAGCAACTCCACAAGAGAGCTGATGGATTGAAAACCCAAACCCTT
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:37982154-37982173
TTCCCGGTACAGACGATTCAATATCCAAGT37982154TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:38496857-38496876
TTCCCGGTACAGACGATTCAATATCCAAGT38496857TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:38188477-38188496
TTCCCGGTACAGATGATTCAATATCCAAGT38188477TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:39341259-39341278
TTCCCGGTACAGATGATTCAATATCCAAGT39341259TGGTTCAGCAACTCCACAAGTTGATAGATGTTCATGAGGTGAGGGTTACA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:37987296-37987315
TTCCCGGTACAGATGATTCAATATCCAAGT37987296TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:36680720-36680739
TTCCCGGTACAGATGATTCAATATCCAAGT36680720TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:36711590-36711609
TTCCCGGTACAGATGATTCAATATCCAAGT36711590TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTACA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:26579111-26579130
TTCCCGGTACAGATGATTCAATATCCAAGT26579111TGGTTCAGCAACTCCACAAGTTGATAGATCTTCATGAGGTGAGGGTTGCA
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:42448734-42448753
TGGTTCTCCGTTATAAGCTATTAATCCACT42448734TGGTTCAGCAACTCCACAAGCACACTACATTTGGAGGGCAACTTATATGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTGTGGAGTTGCTGAACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGTGGAGTTGCTGAACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGTGGAGTTGCTGAACCA&k=0&no_gap=0&offset=0&limit=50
0.141 | 0.044 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTTCAGCAACTCCACAAG&k=0&no_gap=0&offset=0&limit=38
0.156 | 0.014 | cgi_end;

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