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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 21:42:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense DNA, clone:RC0811r.ab1.
DE246109.1:286-305
ATCGAAGATTTAGATCTGTGATCTGAAAGA286GAAAAGATGATGCAAGGAGGAGGAAAATACACTACGATTGATAATCAACA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:59367088-59367107
AGAGATAGATCTGAAGAAGAAGAAAAAGAA59367088GAAAAGATGATGCAAGGAGGAGGAAAATATACAACTATCGATAGTCAACA
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:2066687-2066706
TGTTGATTATCAATTGTTGTATATTTTCCT2066687CCTCCTTGCATCATCTTTTCTTCTTCTTCAGATCACAGATCTATATCTTC
Hibiscus tridactylites genome assembly, chromosome: 3.
OY288267.1:45911433-45911452
TTCATCACAATTGCAAGATATGCCTGACAA45911433CCTCCTTGCATCATCTTTTCTGCTTGCGTAGCCGAGACGAAGTTAGACAA
Hibiscus tridactylites genome assembly, chromosome: 7.
OY288271.1:46368174-46368193
TTCATCACAATTGCAAGATATGCCTGACAA46368174CCTCCTTGCATCATCTTTTCTGCTTGCGTAGCCGAGACAAAGTTAGACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAAAGATGATGCAAGGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAAAGATGATGCAAGGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=GAAAAGATGATGCAAGGAGG&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCCTTGCATCATCTTTTC&k=0&no_gap=0&offset=0&limit=48
0.131 | 0.002 | cgi_end;

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