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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 07:08:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erpetoichthys calabaricus genome assembly, chromosome: 5.
LR536436.2:87507593-87507612
GAATCTCAACTGGACTGTACAATTTAATGA87507593GAAATTCTTTCCATTCATTGATTTAAAGGCACCAGGTATTTTCAAAGTCT
Mus musculus molossinus DNA, clone:MSMg01-485M14.TJ, genomic survey sequence.
AG565149.1:70-89
ACAAAGAGGTGACACTATAGAAGGATCCCA70GAAATTCTTTCCATTCATTGTGTTTCCCACCTTGAATCCAGTAACTGAAA
Nannizziopsis arthrosporioides strain CBS 118890 chromosome IV.
CP098263.1:3880515-3880534
GGCCATCCGTCGCAAAAATGCTGTCTCCCA3880515GAAATTCTTTCCATTCATTGTGGAATCTTTCCCCTTTGCCGTAATCGGCG
Vicia faba genome assembly, chromosome: 2.
OX451737.1:1656778784-1656778803
GATTTCACAATGAACCGTCTCTACAATATT1656778784GAAATTCTTTCCATTCATTGGAGTAATTCGACAACGGACTGCAAACTATC
Ophion slaviceki genome assembly, chromosome: 10.
OX101792.1:6922920-6922939
AACAATGTATTAATTCCACTGTAAATTGAT6922920GAAATTCTTTCCATTCATTGGGAGATATGAAGTTGTTTTTTTTTCGGCGG
Polia nebulosa genome assembly, chromosome: 10.
OX589597.1:19162611-19162630
AATAGCTAGTTAACATAAAACCAATTAATT19162611GAAATTCTTTCCATTCATTGGTGACAATACCCGGTGACGCACGCCGGCGT
Arvicola amphibius genome assembly, chromosome: X.
LR862387.1:36262627-36262646
TTTGCATAACTCTGTATAATAAAAACAAAA36262627CAATGAATGGAAAGAATTTCAAGGAATAATAAAAAGATGTGCTTGAGATT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT14P17, TM0577.
AP007443.2:92384-92403
TTTTCCTTTCACGCAATACTTCCGAAAGGA92384CAATGAATGGAAAGAATTTCACCAAACCCTTCAGAGGTGAACCTTAACAA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT07D18, TM0256.
AP009066.1:81290-81309
TTTTCCTTTCACGCAATACTTCCGAAAGGA81290CAATGAATGGAAAGAATTTCACCAAACCCTTCAGAGGTGAACCTTAACAA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:2386278-2386297
TTTTCCTTTCACGCAATACTTCCGAAAGGA2386278CAATGAATGGAAAGAATTTCACCAAACCCTTCAGAGGTGAACCTTAACAA
Pyrochroa serraticornis genome assembly, chromosome: 5.
HG995156.1:15532259-15532278
AGAGACAACAACAAAAACCTCAAAAGTCCT15532259CAATGAATGGAAAGAATTTCACCTATTTTCAGCTATGTTTAGTAGAATAT
Ophonus ardosiacus genome assembly, chromosome: 4.
OW964826.1:34515824-34515843
ACATACCCTTCAGAAATACCGCCATCTCAT34515824CAATGAATGGAAAGAATTTCGAAAGGCGAAAGGTCTTGTGCTGGGCCACA
Apomyelois bistriatella genome assembly, chromosome: Z.
OX345687.1:3812191-3812210
AAAGGTCTAGGTAGGAGGAGGAACTATATC3812191CAATGAATGGAAAGAATTTCGCATTTAATTTACATAAATCTGTAGGAAGA
Portevinia maculata genome assembly, chromosome: 1.
OX454525.1:18434159-18434178
GACGCACAACCGATGGAGCCTGATAGAAGT18434159CAATGAATGGAAAGAATTTCTGCAACGTCACTGCGATCTTCGAGGCTATT
Stratiomys singularior genome assembly, chromosome: 5.
OX940881.1:10236426-10236445
CATTGACTTTTGGATCAACAATATGAAATG10236426CAATGAATGGAAAGAATTTCGATAATTTAGTTAAAAGCATCTACACTTTC
Tipula vernalis genome assembly, chromosome: 2.
OY282559.1:81643166-81643185
TGAGATAAAACCCAATCAAGCTCTTCTAGC81643166CAATGAATGGAAAGAATTTCAAGCGTTAGAAAGGTCTTTGAAAGGAAAGT
Dolichopus griseipennis genome assembly, chromosome: 1.
OY720441.1:5877168-5877187
GGTACACATTACCAAACCGTATTGAATAAC5877168CAATGAATGGAAAGAATTTCTAGTTTCTATCTTTGTGGAAATTTTAATTT
Spisula subtruncata genome assembly, chromosome: 12.
OY787671.1:23804381-23804400
AGCTGCTAAAGTGTTGTTGTCTCACAAACT23804381CAATGAATGGAAAGAATTTCAAATCAAAATTGGAGTTACTGGGAATTCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAATTCTTTCCATTCATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAATTCTTTCCATTCATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GAAATTCTTTCCATTCATTG&k=0&no_gap=0&offset=0&limit=50
0.123 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CAATGAATGGAAAGAATTTC&k=0&no_gap=0&offset=0&limit=44
0.131 | 0.008 | cgi_end;

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