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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-07 16:23:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:46555606-46555628
ATCACTCTCATTACTCTTAAGAGTAGAGTT46555606GAATCAGGGGAAGGTGCATCGTCAAGATTTTGCACAATTTGAGTTAAGGATAG
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:56936850-56936872
ATCACTCTCATTACTCTTAAGAGAAGAGTT56936850GAATCAGGGGAAGGTGCATCGTCAAGATTTTGCACAATTTGAGTTAAGGATAG
Trifolium repens mRNA, clone: WCC02a20_017, unspecified EST.
FY454967.1:283-305
CTATCCTTAACTCAAATTGTGCAAAATCTT283GACGATGCACCTTCCCCTGATTCCAATCTTCTCTTAAGAGTAATGAGAGTAAT
Trifolium repens mRNA, clone: WCC03j14_022, unspecified EST.
FY455263.1:301-323
CTATCCTTAACTCAAATTGTGCAAAATCTT301GACGATGCACCTTCCCCTGATTCCAATCTTCTCTTAAGAGTAATGAGAGTAAT
Trifolium repens mRNA, clone: WCC03l08_030, unspecified EST.
FY455287.1:306-328
CTATCCTTAACTCAAATTGTGCAAAATCTT306GACGATGCACCTTCCCCTGATTCCACTCTTCTCTTAAGAGTAATGAGAGTGAT
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:8481067-8481089
CTATCCTTAACTCAAATTGTGCAAAATCTC8481067GACGATGCACCTTCCCCTGATTCAACTTTGCTCTTAAGAGTAATGAGAGTGAT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:8990079-8990101
CTATCCTTAACTCAAATTGTGCAAAATCTT8990079GACGATGCACCTTCCCCTGATTCCAATCTTCTCTTAAGAGTAATGAGAGTAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAATCAGGGGAAGGTGCATCGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATCAGGGGAAGGTGCATCGTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GAATCAGGGGAAGGTGCATCGTC&k=0&no_gap=0&offset=0&limit=50
0.341 | 0.247 | search_minus_done; http://172.18.8.135:50400/match?q=GACGATGCACCTTCCCCTGATTC&k=0&no_gap=0&offset=0&limit=48
0.344 | 0.003 | cgi_end;

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