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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 19:40:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens mRNA, clone: WCC04c21_041, unspecified EST.
FY455419.1:475-494
AATTGCCTTTAAGCTCTGTCTGATTGAGGA475GAGGAGCGTATGAGCTGGACTGTGTTGGACCTGACTGTACTGTTGCTGGA
Trifolium repens mRNA, clone: WCC11i08_021, unspecified EST.
FY458002.1:480-499
AATTGCCTTTAAGCTCTGTCTGATTGAGGA480GAGGAGCGTATGAGCTGGACTGTGTTGGACCTGATTGTACTGTTGCTGGA
Trifolium repens mRNA, clone: WCC25b16_050, unspecified EST.
FY462771.1:434-453
AATTGCCTTTAAGCTCTGTCTGATTGAGGA434GAGGAGCGTATGAGCTGGACTGTGTTGGACCTGACTGTACTGTTGCTGGA
Trifolium repens mRNA, clone: WCC39j08_022, unspecified EST.
FY467946.1:479-498
AATTGCCTTTAAGCTCTGTCTGATTGAGGA479GAGGAGCGTATGAGCTGGACTGTGTTGGACCTGACTGTACTGTTGCTGGA
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:21230834-21230853
AATTGCCTTTAAGCTCTGTCTGATTGAGGA21230834GAGGAGCGTATGAGCTGGACTGTGTTGGACCTGACTGTACTGTTGCTGGA
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:21241361-21241380
AATTGCCTTTAAGCTCTGTCTGATTGAGGA21241361GAGGAGCGTATGAGCTGGACTGTGTTGGACCTGACTGTACTGTTGCTGGA
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:24226565-24226584
TCCAGCAACAGTACAGTCAGGTCCAACACA24226565GTCCAGCTCATACGCTCCTCTCCTCAATCAGACAGAGCTTAAAGGCAATT
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:24239800-24239819
TCCAGCAACAGTACAGTCAGGTCCAACACA24239800GTCCAGCTCATACGCTCCTCTCCTCAATCAGACAGAGCTTAAAGGCAATT
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:35038357-35038376
TCCAGCAACAGTACAATCAGGTCCAACACA35038357GTCCAGCTCATACGCTCCTCTCCTCAATCAGACAGAGCTTAAAGGCAATT
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:35046308-35046327
TCCAGCAACAGTACAGTCAAGTCCAACACA35046308GTCCAGCTCATACGCTCCTCTCCTCAATCAGACAGAGCTTAAAGGCAATT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:26450021-26450040
TCCAGCAACAGTACAGTCAGGTCCAACACA26450021GTCCAGCTCATACGCTCCTCTCCTCAATCAGACAGAGCTTAAAGGCAATT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:26458612-26458631
TCCAGCAACAGTACAGTCAGGTCCAACACA26458612GTCCAGCTCATACGCTCCTCTCCTCAATCAGACAGAGCTTAAAGGCAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGAGCGTATGAGCTGGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGAGCGTATGAGCTGGAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.460 | 0.451 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGAGCGTATGAGCTGGAC&k=0&no_gap=0&offset=0&limit=50
0.482 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GTCCAGCTCATACGCTCCTC&k=0&no_gap=0&offset=0&limit=44
0.485 | 0.004 | cgi_end;

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