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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:16:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-36946 Leaf Coffea canephora cDNA clone cccl25j8 5', mRNA sequence.
DV692917.1:200-221
ACTTTCCAAGGAGTAGCCAACTACCCTCCT200CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCGGGTGCCTCAGATC
TransId-226233 CACATN1 Coffea arabica cDNA clone CACATN1-8729TV similar to F20D23.22 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GR994565.1:54-75
ACTTTCTTAGGAGTAGCCAACTACCCTCCT54CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCCTCAGATC
TransId-231018 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEVP22TV similar to F20D23.22 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT005889.1:337-358
ACTTTCCAAGGAGTAGCCAACTACCCTCCT337CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCCTCAGATC
TransId-234322 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEWT55TV similar to F20D23.22 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT007099.1:322-343
ACTTTCCAAGGAGTAGCCAACTACCCTCCT322CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCCTCAGATC
CC00-XX-EC1-073-H04-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-073-H04-EC, mRNA sequence.
GT655845.1:165-186
ACTTTCCAAGGAGTAGCCAACTACCCTCCT165CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCATCAGATC
CR00-XX-FR4-053-F06-EQ.F Coffea racemosa FR4 Coffea racemosa cDNA clone CR00-XX-FR4-053-F06-EQ, mRNA sequence.
GT661822.1:149-170
ACTTTCCAAGGAGTAGCCAACTACCCTCCT149CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCCTCAGATC
CA00-XX-FB2-051-H02-EP.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-051-H02-EP, mRNA sequence.
GW463745.1:173-194
ACTTTCCAAGGAGTAGCCAACTACCCTCCT173CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCCTCAGATC
CA00-XX-FB2-048-H02-MC.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-048-H02-MC, mRNA sequence.
GW484728.1:178-199
ACTTTCCAAGGAGTAGCCAACTACCCTCCT178CAACCAGTGATCGGCTTCCCTCAGCCGGTCCCACCTCCAGGTGCCTCAGATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGGAAGCCGATCACTGGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGGAAGCCGATCACTGGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGGAAGCCGATCACTGGTTG&k=0&no_gap=0&offset=0&limit=50
0.746 | 0.651 | search_minus_done; http://172.18.8.135:50400/match?q=CAACCAGTGATCGGCTTCCCTC&k=0&no_gap=0&offset=0&limit=50
0.751 | 0.006 | cgi_end;

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