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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 18:39:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scomber scombrus genome assembly, chromosome: 10.
OY829927.1:28472860-28472879
GCCATCTGATAAACTGTAGCACAAGAAAGA28472860ATACCAACCCAAAACCCCTCCTTTTTCCATAGATTTGTTGCTTTTATTTA
RIRL_008449 Ralstonia solanacearum challenged root cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocprra0_0100_B01.ab1, mRNA sequence.
JK208541.1:22-41
GGGGATATAACCCTAACATCA22ATACCAACCCAAAACCCCTCTTCCTCTCTTTCTCTCTTCATTCCTAAAAC
Arachis hypogaea DNA, clone: NYHA00A37, cultivar: Nakateyutaka.
DE998921.1:525-544
TAAAAAAAATACTATATAACCCTAACATCA525ATACCAACCCAAAACCCCTCTTCCTCTCTTTCTCTCTTCATTCCTAANAC
Arachis hypogaea cultivar Shitouqi chromosome A02.
CP030984.1:92604273-92604292
AAAAAAAACTACTATATAACCCTAACATCA92604273ATACCAACCCAAAACCCCTCCTCCTCTCTTTCTCTCTTCATTTCTAAAAC
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:106508943-106508962
TAAAAAAAATACTATATAACCCTAACATCA106508943ATACCAACCCAAAACCCCTCTTCCTCTCTTTCTCTCTTCATTCCTAAAAC
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:105988241-105988260
TAAAAAAAATACTATATAACCCTAACATCA105988241ATACCAACCCAAAACCCCTCTTCCTCTCTTTCTCTCTTCATTCCTAAAAC
Viscum album genome assembly, chromosome: B1.
OY728167.1:102364729-102364748
ACACTTCAAAAAACCATTTTTTTTTGGAAA102364729ATACCAACCCAAAACCCCTCAAAGAATACCTACCCACATTCTTAATTCCT
Viscum album genome assembly, chromosome: B1.
OY728167.1:115138392-115138411
ACACTTCAAAAAACCATTTTTTTTTGGAAA115138392ATACCAACCCAAAACCCCTCAAAGAATACCTACCCACATTCTTAATTCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGGGTTTTGGGTTGGTAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGGGTTTTGGGTTGGTAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGGGTTTTGGGTTGGTAT&k=0&no_gap=0&offset=0&limit=50
0.240 | 0.142 | search_minus_done; http://172.18.8.135:50400/match?q=ATACCAACCCAAAACCCCTC&k=0&no_gap=0&offset=0&limit=50
0.246 | 0.005 | cgi_end;

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