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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 02:26:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rhinatrema bivittatum genome assembly, chromosome: 7.
LR584393.1:294914451-294914470
TAATAGAGTAGAAAAGAGAAACATGACCTG294914451GATGACGTCGGCAGGTAAAGGCCTCAAGGCCCATCCGGTTTGCCCATTTG
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:35883613-35883632
TGGGTTCTTCACTGGGGAGTTAATTATGTG35883613GATGACGTCGGCAGGTAAAGTTTCAGACTTTAATGGTATATTGCAGTCTC
Comarum palustre genome assembly, chromosome: 15.
OX637586.1:2535385-2535404
TGGATTCTTCACTGGGGAGTCTCACTTGTT2535385GATGACGTCGGCAGGTAAAGAGCTTAGACCTTGATATTTAGATGTTCCGA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:25393097-25393116
TGGGTTCTTCACTGGGGAGTTAATTATGTG25393097GATGACGTCGGCAGGTAAAGCTTCAGACTTTAATGGTAGATTGCGGTCTC
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:4817026-4817045
GAGACTGCAATCTACCATTAAAGTCTGAAG4817026CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:5080252-5080271
GAGACTGCAATCTACCATTAAAGTCTGAAA5080252CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:37886648-37886667
GAGACTGCAATATACCATTAAAGTCTGAAA37886648CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:5153947-5153966
GAGACTGCAATCTACCATTAAAGTCTGAAA5153947CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:4909813-4909832
GAGACTGCAATCTACCATTAAAGTCTGAAG4909813CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:5073796-5073815
GAGACTGCAATCTACCATTAAAGTCTGAAA5073796CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus domestica genome assembly, chromosome: 13.
OU745003.1:4953595-4953614
GAGACTGCAATCTACCATTAAAGTCTGAAA4953595CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:5105298-5105317
GAGACTGCAATCTACCATTAAAGTCTGAAA5105298CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:5387383-5387402
GAGACTGCAATCTACCATTAAAGTCTGAAG5387383CTTTACCTGCCGACGTCATCCACATAATTAACTCCCCAGTGAAGAACCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATGACGTCGGCAGGTAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGACGTCGGCAGGTAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=GATGACGTCGGCAGGTAAAG&k=0&no_gap=0&offset=0&limit=50
0.121 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTACCTGCCGACGTCATC&k=0&no_gap=0&offset=0&limit=46
0.127 | 0.006 | cgi_end;

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