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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 19:42:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Watersipora subatra genome assembly, chromosome: 1.
OY755158.1:47518703-47518722
ACCATTACAGATTCACGAGCGACTCAAGTG47518703GATGGAAGTGAAAAGGGCTGAATTGACCACCGAGTTGGTTCAGGTCTTGT
Chionomys nivalis genome assembly, chromosome: 16.
OX465464.1:49410417-49410436
GGGTTGATGGGAATTGTCCCTACTGAATCT49410417CAGCCCTTTTCACTTCCATCAAAGTCTCTTTCTATGTAACCTACAACATG
Cyprinus carpio genome assembly, scaffold: 000002261.
LN591108.1:147712-147731
CAGCCAGTTGATCTCCCTTTCCTATCTACA147712CAGCCCTTTTCACTTCCATCCTGATCTAATCCATGTCAGTACTGTGGATC
Argyrosomus regius genome assembly, chromosome: 6.
OX336887.1:23283886-23283905
TGTTGATATCTTGCTTGATTCTTGCAAATT23283886CAGCCCTTTTCACTTCCATCCTGTGCAGGCACACACATTTTGCTACTTTT
Trifolium repens mRNA, clone: WCC15i10_053, unspecified EST.
FY459383.1:51-70
TTCTCATCCATTTTTCCCAACTCTCAAATT51CAGCCCTTTTCACTTCCATCTAAAATGACCCAATTCATCTTCTAAAAAAT
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:15739918-15739937
TCTCAATCCATTTTTCCCAACTCTCAAATT15739918CAGCCCTTTTCACTTCCATCTAAAATGACCCAATTCATCTTCTAAAAAAT
Acentria ephemerella genome assembly, chromosome: 24.
OW971898.1:421995-422014
AATGTTGTTTTGTATCCATTACTGAAATCA421995CAGCCCTTTTCACTTCCATCTTTATAATTCTGTCAGAGTCAAAGTTCGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATGGAAGTGAAAAGGGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGGAAGTGAAAAGGGCTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=GATGGAAGTGAAAAGGGCTG&k=0&no_gap=0&offset=0&limit=50
0.209 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCCCTTTTCACTTCCATC&k=0&no_gap=0&offset=0&limit=49
0.214 | 0.004 | cgi_end;

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